RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 MORF4L1Q9UBU8 362 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 KIAA1257Q9ULG3 409 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 RUVBL2Q9Y230 463 aaKnown RBP13.37□□□□□ -0.27
CLGN-201ENST00000325617 C9JVG2 144 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 TRPA1O75762 1119 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 NCAM1P13591 858 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 DESP17661 470 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 PIK3R1P27986 724 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 GRIA4P48058 902 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 FBXW8Q8N3Y1 598 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.37□□□□□ -0.27
CLGN-201ENST00000325617 CDCA5Q96FF9 252 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 VPS39Q96JC1 886 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 RBBP8Q99708 897 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 MKS1Q9NXB0 559 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 UBAP1Q9NZ09 502 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 SF3B1O75533 1304 aaKnown RBP eCLIP13.37□□□□□ -0.27
CLGN-201ENST00000325617 hCG_2014768A0A024R1R8 64 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 DYNC1LI2O43237 492 aaPredicted RBP13.37□□□□□ -0.27
CLGN-201ENST00000325617 CSPG5O95196 566 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 SBK3P0C264 359 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 SMPD1P17405 629 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 MX2P20592 715 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 RPL10P27635 214 aaKnown RBP13.37□□□□□ -0.27
CLGN-201ENST00000325617 GABRB3P28472 473 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 GJA5P36382 358 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 FDFT1P37268 417 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 NR2C2P49116 596 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 PDK3Q15120 406 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 FAM187BQ17R55 369 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 SLC25A52Q3SY17 297 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 C6orf52Q5T4I8 152 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 KCNMB4Q86W47 210 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 APPL2Q8NEU8 664 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 HASPINQ8TF76 798 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 PPP2R3CQ969Q6 453 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 DDIT4Q9NX09 232 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 MPP3Q13368 585 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 USP10Q14694 798 aaKnown RBP13.36□□□□□ -0.27
CLGN-201ENST00000325617 R3HDM1Q15032 1099 aaKnown RBP13.36□□□□□ -0.27
CLGN-201ENST00000325617 LIN52Q52LA3 116 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 PITRM1Q5JRX3 1037 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 RWDD4Q6NW29 188 aaKnown RBP13.36□□□□□ -0.27
CLGN-201ENST00000325617 EPGNQ6UW88 154 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 NT5DC4Q86YG4 428 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 B3GALNT2Q8NCR0 500 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 FAM110BQ8TC76 370 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 ACTRT2Q8TDY3 377 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 DCPSQ96C86 337 aaKnown RBP13.36□□□□□ -0.27
CLGN-201ENST00000325617 PAAF1Q9BRP4 392 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 DDX43Q9NXZ2 648 aaKnown RBP13.36□□□□□ -0.27
CLGN-201ENST00000325617 LTBP3Q9NS15 1303 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 HTTP42858 3142 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 MYBPHLA2RUH7 354 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 CCNT2O60583 730 aaKnown RBP13.36□□□□□ -0.27
CLGN-201ENST00000325617 DNAJA2O60884 412 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 ZFXP17010 805 aaPredicted RBP13.36□□□□□ -0.27
CLGN-201ENST00000325617 CHRNA4P43681 627 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 TPI1P60174 286 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 CEACAM7Q14002 265 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 PDK1Q15118 436 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 ZBTB6Q15916 424 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 NRF1Q16656 503 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 LDB1Q86U70 411 aaPredicted RBP13.36□□□□□ -0.27
CLGN-201ENST00000325617 CEP97Q8IW35 865 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 DSELQ8IZU8 1212 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 LILRA2Q8N149 483 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 SIX6OS1Q8N1H7 587 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 LPPQ93052 612 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 NXNL1Q96CM4 212 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 ZNF419Q96HQ0 510 aaPredicted RBP13.36□□□□□ -0.27
CLGN-201ENST00000325617 NDNQ99608 321 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 ACE2Q9BYF1 805 aaPredicted RBP13.36□□□□□ -0.27
CLGN-201ENST00000325617 PCDHAC1Q9H158 963 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 TNFRSF12AQ9NP84 129 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 BFARQ9NZS9 450 aa13.36□□□□□ -0.27
CLGN-201ENST00000325617 DFFAO00273 331 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 TRIM13O60858 407 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 VAPBO95292 243 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 SNAI1O95863 264 aaPredicted RBP13.35□□□□□ -0.27
CLGN-201ENST00000325617 UQCRBP14927 111 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 PMLP29590 882 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 ALDH1A3P47895 512 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 HARS2P49590 506 aaKnown RBP13.35□□□□□ -0.27
CLGN-201ENST00000325617 NME5P56597 212 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 ROR2Q01974 943 aaKnown RBP13.35□□□□□ -0.27
CLGN-201ENST00000325617 POU5F1BQ06416 359 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 LAMC2Q13753 1193 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 SLC27A1Q6PCB7 646 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 GK5Q6ZS86 529 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 MFSD6LQ8IWD5 586 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 IPMKQ8NFU5 416 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 GRIN3AQ8TCU5 1115 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 CMTM5Q96DZ9 223 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.35□□□□□ -0.27
CLGN-201ENST00000325617 ARHGAP26Q9UNA1 814 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 PCDHB12Q9Y5F1 795 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 HEMK1Q9Y5R4 338 aaPredicted RBP13.35□□□□□ -0.27
CLGN-201ENST00000325617 ATP6AP2A0A1C7CYW4 349 aa13.35□□□□□ -0.27
CLGN-201ENST00000325617 HUS1O60921 280 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms