RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 TRIM8Q9BZR9 551 aa12.52□□□□□ -0.4
CACNA1F-201ENST00000323022 KLC4Q9NSK0 619 aa12.52□□□□□ -0.4
CACNA1F-201ENST00000323022 TAF6LQ9Y6J9 622 aa12.52□□□□□ -0.4
CACNA1F-201ENST00000323022 FOXN3O00409 490 aaPredicted RBP12.52□□□□□ -0.4
CACNA1F-201ENST00000323022 SMPD1P17405 629 aa12.52□□□□□ -0.4
CACNA1F-201ENST00000323022 PSEN1P49768 467 aa12.52□□□□□ -0.4
CACNA1F-201ENST00000323022 ARL14EPQ8N8R7 260 aaPredicted RBP12.52□□□□□ -0.4
CACNA1F-201ENST00000323022 CNDP1Q96KN2 507 aa12.52□□□□□ -0.4
CACNA1F-201ENST00000323022 SLC4A5Q9BY07 1137 aa12.52□□□□□ -0.4
CACNA1F-201ENST00000323022 ADAM28Q9UKQ2 775 aa12.52□□□□□ -0.4
CACNA1F-201ENST00000323022 SMG5Q9UPR3 1016 aaKnown RBP12.52□□□□□ -0.4
CACNA1F-201ENST00000323022 FOXP2O15409 715 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 CLK1P49759 484 aaKnown RBP12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 SF1Q15637 639 aaKnown RBP12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 GALNT13Q8IUC8 556 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 DTNBP1Q96EV8 351 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 ATP6V1G3Q96LB4 118 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 SALL1Q9NSC2 1324 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 SULT2A1Q06520 285 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 KLHDC7AQ5VTJ3 777 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 CNKSR3Q6P9H4 555 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 P4HA3Q7Z4N8 544 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 LEMD2Q8NC56 503 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 KIAA1143Q96AT1 154 aaPredicted RBP12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 KAZALD1Q96I82 304 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 TTLL2Q9BWV7 592 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 REXO4Q9GZR2 422 aaKnown RBP12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 INTS7Q9NVH2 962 aaKnown RBP12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 ZMYM2Q9UBW7 1377 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 FPGTO14772 594 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 RPL21P46778 160 aaKnown RBP12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 CBX2Q14781 532 aaPredicted RBP12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 DNAL1Q4LDG9 190 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 SMPDL3BQ92485 455 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 TBL1YQ9BQ87 522 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 BRINP2Q9C0B6 783 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 PIF1Q9H611 641 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 HCN3Q9P1Z3 774 aa12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 PSMC3IPQ9P2W1 217 aaPredicted RBP12.52□□□□□ -0.41
CACNA1F-201ENST00000323022 SNTNA6NMZ2 147 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 TK2O00142 265 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 B4GALT5O43286 388 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 PHF2O75151 1096 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 CFHP08603 1231 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 CD86P42081 329 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 TAF10Q12962 218 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 CARTPTQ16568 116 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 MPPE1Q53F39 396 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 TSHZ1Q6ZSZ6 1077 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 ZNF720Q7Z2F6 126 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 SPATA21Q7Z572 469 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 KCNK16Q96T55 309 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 THAP2Q9H0W7 228 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 TLR9Q9NR96 1032 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 MRGBPQ9NV56 204 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 CNTNAP1P78357 1384 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 CFAP73A6NFT4 308 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 AIM2O14862 343 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 MDM4O15151 490 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 CORO1AP31146 461 aaKnown RBP12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 IGFALSP35858 605 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 KCNJ1P48048 391 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 DGKGP49619 791 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 NUDT2P50583 147 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 IRX1P78414 480 aaPredicted RBP12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 GAD2Q05329 585 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 CSTF3Q12996 717 aaKnown RBP12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 TUSC3Q13454 348 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 LONRF1Q17RB8 773 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 ZNF544Q6NX49 715 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 LRRC69Q6ZNQ3 347 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 STRA8Q7Z7C7 330 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 ZSWIM2Q8NEG5 633 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 ERVW-1Q9UQF0 538 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 NWD1Q149M9 1564 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 ITGAVP06756 1048 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 NPR3P17342 541 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 GPR15P49685 360 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 NUP107P57740 925 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 CAP1Q01518 475 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 MACC1Q6ZN28 852 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 PPIL6Q8IXY8 311 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 TTC29Q8NA56 475 aaPredicted RBP12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 DCBLD2Q96PD2 775 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 PRMT1Q99873 361 aaKnown RBP12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 NRDE2Q9H7Z3 1164 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 NPHS2Q9NP85 383 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 ARHGAP23Q9P227 1491 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 GUCY1B2O75343 617 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 ZNF682O95780 498 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 CATP04040 527 aaKnown RBP12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 CASRP41180 1078 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 MOXD1Q6UVY6 613 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 FAM20CQ8IXL6 584 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 ADSSL1Q8N142 457 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 DPP10Q8N608 796 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 KXD1Q9BQD3 176 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 SLC32A1Q9H598 525 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 IMPAD1Q9NX62 359 aa12.51□□□□□ -0.41
CACNA1F-201ENST00000323022 SMIM35A0A1B0GVV1 85 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms