RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 HERC6Q8IVU3 1022 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 EMC1Q8N766 993 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 ABCB10Q9NRK6 738 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 FAM86C1Q9NVL1 165 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 AFF4Q9UHB7 1163 aaKnown RBP9.87□□□□□ -0.83
COL12A1-201ENST00000322507 AGAP1Q9UPQ3 857 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 CIB4A0PJX0 185 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 ERI2A8K979 691 aaKnown RBP9.87□□□□□ -0.83
COL12A1-201ENST00000322507 M0R036 132 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 NADKO95544 446 aaPredicted RBP9.87□□□□□ -0.83
COL12A1-201ENST00000322507 NR4A1P22736 598 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 MATKP42679 507 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 MAZP56270 477 aaKnown RBP9.87□□□□□ -0.83
COL12A1-201ENST00000322507 BORAQ6PGQ7 559 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 L2HGDHQ9H9P8 463 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 RBM12Q9NTZ6 932 aaKnown RBP9.87□□□□□ -0.83
COL12A1-201ENST00000322507 KLHDC7AQ5VTJ3 777 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 IL31Q6EBC2 164 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 YTHDF3Q7Z739 585 aaKnown RBP9.87□□□□□ -0.83
COL12A1-201ENST00000322507 DRAXINQ8NBI3 349 aaPredicted RBP9.87□□□□□ -0.83
COL12A1-201ENST00000322507 CENPIQ92674 756 aaPredicted RBP9.87□□□□□ -0.83
COL12A1-201ENST00000322507 CCDC74AQ96AQ1 378 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 PLEKHA6Q9Y2H5 1048 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 NCK2O43639 380 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 OR7A10O76100 309 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 SPP2Q13103 211 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 CHI3L2Q15782 390 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 MOB1BQ7L9L4 216 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 INO80EQ8NBZ0 244 aaPredicted RBP9.87□□□□□ -0.83
COL12A1-201ENST00000322507 DOLKQ9UPQ8 538 aa9.87□□□□□ -0.83
COL12A1-201ENST00000322507 TEX33O43247 280 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 IFNA10P01566 189 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 IFNA4P05014 189 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 CRABP2P29373 138 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 DPF1Q92782 380 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 NEK6Q9HC98 313 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 LOC110117498-PIK3R3F6TDL0 507 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 NKRFO15226 690 aaKnown RBP eCLIP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 RPL10AP62906 217 aaKnown RBP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 CBLBQ13191 982 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 PLET1Q6UQ28 207 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 DDX53Q86TM3 631 aaKnown RBP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 EPHX4Q8IUS5 362 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 KYQ8NBH2 561 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 RAET1EQ8TD07 263 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 PIK3R3Q92569 461 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 MXRA8Q9BRK3 442 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 RNF38Q9H0F5 515 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 IRF2BPLQ9H1B7 796 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 BRD9Q9H8M2 597 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 RNF112Q9ULX5 631 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 TTLL13PA6NNM8 815 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 GPR182O15218 404 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 SNAP91O60641 907 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 NUDT2P50583 147 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 PNPLA3Q9NST1 481 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 A0A088AWK7 358 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 FAM220BPB1ANY3 271 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 ZNF10P21506 573 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 ECHS1P30084 290 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 LONRF1Q17RB8 773 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 PHC2Q8IXK0 858 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 MYO1HQ8N1T3 1032 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 VANGL1Q8TAA9 524 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 PCDH19Q8TAB3 1148 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 LURAP1Q96LR2 239 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 WDCPQ9H6R7 721 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 TAGLN3Q9UI15 199 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 SLC25A13Q9UJS0 675 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 RPS6KL1Q9Y6S9 549 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 PRKCEQ02156 737 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 NFE2Q16621 373 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 URB1O60287 2271 aaKnown RBP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 CST8O60676 142 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 KIZQ2M2Z5 673 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 KANSL1Q7Z3B3 1105 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 UGT2B28Q9BY64 529 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 CLPBQ9H078 707 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 FBXO44Q9H4M3 255 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 RPL26L1Q9UNX3 145 aaKnown RBP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 FAM20BO75063 409 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 YES1P07947 543 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 PTPN4P29074 926 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 KYAT3Q6YP21 454 aaKnown RBP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 NYAP1Q6ZVC0 841 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 NCCRP1Q6ZVX7 275 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 SLC26A11Q86WA9 606 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 EID3Q8N140 333 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 MAGEC3Q8TD91 643 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 OXER1Q8TDS5 423 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 ZNF304Q9HCX3 659 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 MYH7BA7E2Y1 1941 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 C1orf196B1AJZ1 125 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 IFRD1O00458 451 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 NR3C2P08235 984 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 PDHBP11177 359 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 RPL3P39023 403 aaKnown RBP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 CYP4F8P98187 520 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 PRKAA1Q13131 559 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms