RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 CRHR1P34998 444 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 TAF10Q12962 218 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 SERINC3Q13530 473 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 ARHGAP36Q6ZRI8 547 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 PACS2Q86VP3 889 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 ABI1Q8IZP0 508 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 ARRDC2Q8TBH0 407 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 BCAS4Q8TDM0 211 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 IGSF8Q969P0 613 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 PSMG2Q969U7 264 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 MYEOVQ96EZ4 313 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 TRIB3Q96RU7 358 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 FERMT1Q9BQL6 677 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 SLC25A51Q9H1U9 297 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 IL23AQ9NPF7 189 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 INTS9Q9NV88 658 aaKnown RBP7.33□□□□□ -1.24
NPHP1-201ENST00000316534 PRG3Q9Y2Y8 225 aaPredicted RBP7.33□□□□□ -1.24
NPHP1-201ENST00000316534 AAR2Q9Y312 384 aaKnown RBP7.33□□□□□ -1.24
NPHP1-201ENST00000316534 RRP15Q9Y3B9 282 aaKnown RBP7.33□□□□□ -1.24
NPHP1-201ENST00000316534 PLXNA2O75051 1894 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 GOLGA8MH3BSY2 632 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 MSI1O43347 362 aaKnown RBP7.32□□□□□ -1.24
NPHP1-201ENST00000316534 PRAMEF11O60813 436 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 TGDSO95455 350 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 APRTP07741 180 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 CR2P20023 1033 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 EPHB2P29323 1055 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 WEE1P30291 646 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 SLCO1A2P46721 670 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 SEC24CP53992 1094 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 AP1B1Q10567 949 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 CCT6BQ92526 530 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 MRGPRX2Q96LB1 330 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 KDM4CQ9H3R0 1056 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 SYBUQ9NX95 663 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 SIRPGQ9P1W8 387 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 ASB3Q9Y575 518 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 RASA4BC9J798 803 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 BIRC5O15392 142 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 RASA4O43374 803 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 SNX3O60493 162 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 RASSF9O75901 435 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 CCNB1P14635 433 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 NFKB1P19838 968 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 HPDP32754 393 aaPredicted RBP7.32□□□□□ -1.24
NPHP1-201ENST00000316534 PAPOLAP51003 745 aaKnown RBP7.32□□□□□ -1.24
NPHP1-201ENST00000316534 CDR1P51861 262 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 RFTN1Q14699 578 aaPredicted RBP7.32□□□□□ -1.24
NPHP1-201ENST00000316534 SLC1A5Q15758 541 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 TEDDM1Q5T9Z0 273 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 FBXL22Q6P050 247 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 PRSS55Q6UWB4 352 aaPredicted RBP7.32□□□□□ -1.24
NPHP1-201ENST00000316534 LRRC6Q86X45 466 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 PALM2Q8IXS6 379 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 PDCD7Q8N8D1 485 aaKnown RBP7.32□□□□□ -1.24
NPHP1-201ENST00000316534 FBXO32Q969P5 355 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 PRICKLE1Q96MT3 831 aaPredicted RBP7.32□□□□□ -1.24
NPHP1-201ENST00000316534 VPS45Q9NRW7 570 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 OR51B4Q9Y5P0 310 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 CDY1Q9Y6F8 540 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 SNNO75324 88 aaPredicted RBP7.32□□□□□ -1.24
NPHP1-201ENST00000316534 EPOP01588 193 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 HLA-DQB2P05538 268 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 CTSAP10619 480 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 ARNTP27540 789 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 HOXD9P28356 352 aaPredicted RBP7.32□□□□□ -1.24
NPHP1-201ENST00000316534 SLC6A4P31645 630 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 RPA3P35244 121 aaPredicted RBP7.32□□□□□ -1.24
NPHP1-201ENST00000316534 CSE1LP55060 971 aaKnown RBP7.32□□□□□ -1.24
NPHP1-201ENST00000316534 BBS9Q3SYG4 887 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 GRTP1Q5TC63 336 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 TRMT10BQ6PF06 316 aaKnown RBP7.32□□□□□ -1.24
NPHP1-201ENST00000316534 PGBD5Q8N414 524 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 SEC16BQ96JE7 1060 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 B3GALT6Q96L58 329 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 CPNE1Q99829 537 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 MGME1Q9BQP7 344 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 VPS37BQ9H9H4 285 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 DNMT3LQ9UJW3 386 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 NR2E3Q9Y5X4 410 aa7.32□□□□□ -1.24
NPHP1-201ENST00000316534 FOXO6A8MYZ6 492 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 SNRPAP09012 282 aaKnown RBP7.31□□□□□ -1.24
NPHP1-201ENST00000316534 ATXN1LP0C7T5 689 aaKnown RBP7.31□□□□□ -1.24
NPHP1-201ENST00000316534 MSH2P43246 934 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 CDH4P55283 916 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 DEFB103AP81534 67 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 ANO4Q32M45 955 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 ALFQ53S48 1182 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 POTEHQ6S545 545 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 PACS1Q6VY07 963 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 LRRC34Q8IZ02 419 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 CPXM2Q8N436 756 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 ALG14Q96F25 216 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 ZNF558Q96NG5 402 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 ENTPD7Q9NQZ7 604 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 MARCH2Q9P0N8 246 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 EMCNQ9ULC0 261 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 SLC12A4Q9UP95 1085 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 SSX2IPQ9Y2D8 614 aa7.31□□□□□ -1.24
NPHP1-201ENST00000316534 PLLPQ9Y342 182 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms