RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 AP3S1Q92572 193 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 PMM1Q92871 262 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 CAMKK2Q96RR4 588 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 SLC35C2Q9NQQ7 365 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 FEM1BQ9UK73 627 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 G3V2T6 193 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 C2CD2LO14523 706 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 RBP1P09455 135 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 PSKH1P11801 424 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 TTKP33981 857 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 TTLL4Q14679 1199 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 SPATA6LQ8N4H0 392 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 SLC47A1Q96FL8 570 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 PCDH10Q9P2E7 1040 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 STX11O75558 287 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 ARMC8Q8IUR7 673 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 AP2A2O94973 939 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 NPTXRO95502 500 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 GH1P01241 217 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 ITGB3P05106 788 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 HNMTP50135 292 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 PDIA5Q14554 519 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 RRP1BQ14684 758 aaKnown RBP8.86□□□□□ -0.99
USF3-201ENST00000316407 AFTPHQ6ULP2 937 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 KCNS3Q9BQ31 491 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 ABI2Q9NYB9 513 aaPredicted RBP8.86□□□□□ -0.99
USF3-201ENST00000316407 TBX20Q9UMR3 447 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 ERGIC3Q9Y282 383 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 CDC42BPAQ5VT25 1732 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 LOC102724428A0A0B4J2F2 783 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 CTSHP09668 335 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 SLC9A3P48764 834 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 AQP4P55087 323 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 SIK1P57059 783 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 MGAT5Q09328 741 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 PHACTR4Q8IZ21 702 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 TRPV3Q8NET8 790 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 DIRAS2Q96HU8 199 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 IL25Q9H293 177 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 ELL3Q9HB65 397 aaPredicted RBP8.86□□□□□ -0.99
USF3-201ENST00000316407 DNPEPQ9ULA0 475 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 DHRS7Q9Y394 339 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 NUDT14O95848 222 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 MT-ND1P03886 318 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 GPSM2P81274 684 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 SEMA3AQ14563 771 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 TFAP2DQ7Z6R9 452 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 ACOT1Q86TX2 421 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 GHDCQ8N2G8 530 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 IGDCC4Q8TDY8 1250 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 RXFP2Q8WXD0 754 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 CELF6Q96J87 481 aaKnown RBP8.86□□□□□ -0.99
USF3-201ENST00000316407 RASSF1Q9NS23 344 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 PTGFRNQ9P2B2 879 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 MALT1Q9UDY8 824 aa8.86□□□□□ -0.99
USF3-201ENST00000316407 GLP2RO95838 553 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 PABPC1P11940 636 aaKnown RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 ZFP14Q9HCL3 533 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.85□□□□□ -0.99
USF3-201ENST00000316407 MORF4L1Q9UBU8 362 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 FAM240BA0A1B0GVZ2 78 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 DDX3XO00571 662 aaKnown RBP eCLIP8.85□□□□□ -0.993e-6■■■■■ 39.4
USF3-201ENST00000316407 RPS6KA5O75582 802 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 LYPLA1O75608 230 aaPredicted RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 PIGNO95427 931 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 CST1P01037 141 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 AP3M2P53677 418 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 TUBA4AP68366 448 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 SNX17Q15036 470 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 HLFQ16534 295 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 TTC39CQ8N584 583 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 S100A13Q99584 98 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 SLC25A23Q9BV35 468 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 IGSF9BQ9UPX0 1349 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 DHRS12A0PJE2 317 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 SCAMP1O15126 338 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 DDX3YO15523 660 aaKnown RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 RECQL5O94762 991 aaPredicted RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 GJB6O95452 261 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 CYP2F1P24903 491 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 TMC7Q7Z402 723 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 FAM220AQ7Z4H9 259 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 SLFN11Q7Z7L1 901 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 ZC3H7AQ8IWR0 971 aaKnown RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 LEMD2Q8NC56 503 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 ENGASEQ8NFI3 743 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 C11orf24Q96F05 449 aaPredicted RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 VPS35Q96QK1 796 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 ALDH8A1Q9H2A2 487 aaPredicted RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 DNAAF2Q9NVR5 837 aaKnown RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 GTF3C4Q9UKN8 822 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 GPC6Q9Y625 555 aaPredicted RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 LRRC14BA6NHZ5 514 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 CDC42P60953 191 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 SPDYCQ5MJ68 293 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 SWT1Q5T5J6 900 aaKnown RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 MBOAT7Q96N66 472 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 RNF146Q9NTX7 359 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 NINJ2Q9NZG7 142 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 BTN3A1O00481 513 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms