RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 ZC3H12BQ5HYM0 836 aaKnown RBP9.16□□□□□ -0.94
CTC1-201ENST00000315684 OR7D4Q8NG98 312 aa9.16□□□□□ -0.94
CTC1-201ENST00000315684 NDNQ99608 321 aa9.16□□□□□ -0.94
CTC1-201ENST00000315684 ARL15Q9NXU5 204 aa9.16□□□□□ -0.94
CTC1-201ENST00000315684 TCP11X1B4DZS4 312 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 AIM2O14862 343 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 HCRTO43612 131 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 GCNT1Q02742 428 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 ATXN7L2Q5T6C5 722 aaPredicted RBP9.15□□□□□ -0.94
CTC1-201ENST00000315684 C1orf127Q8N9H9 656 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 SLC22A17Q8WUG5 538 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 SYN3O14994 580 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 GAD2Q05329 585 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 TGM3Q08188 693 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 VAC14Q08AM6 782 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 PRKG2Q13237 762 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 IRGCQ6NXR0 463 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 LVRNQ6Q4G3 990 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 RERGQ96A58 199 aaPredicted RBP9.15□□□□□ -0.94
CTC1-201ENST00000315684 DNAJC19Q96DA6 116 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 TEPSINQ96N21 525 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 NRDE2Q9H7Z3 1164 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 WRAP73Q9P2S5 460 aaPredicted RBP9.15□□□□□ -0.94
CTC1-201ENST00000315684 ASF1AQ9Y294 204 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 CAPN6Q9Y6Q1 641 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 KANSL1LA0AUZ9 987 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 B4DGG1 531 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 RFPL2O75678 378 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 SERPINH1P50454 418 aaKnown RBP9.15□□□□□ -0.94
CTC1-201ENST00000315684 KCNMB4Q86W47 210 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 GMLQ99445 158 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 FBXO6Q9NRD1 293 aaPredicted RBP9.15□□□□□ -0.94
CTC1-201ENST00000315684 FLRT1Q9NZU1 646 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 ARHGAP20Q9P2F6 1191 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 AHDC1Q5TGY3 1603 aaPredicted RBP9.15□□□□□ -0.94
CTC1-201ENST00000315684 C10orf71Q711Q0 1435 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.15□□□□□ -0.94
CTC1-201ENST00000315684 RPL7AP62424 266 aaKnown RBP9.15□□□□□ -0.94
CTC1-201ENST00000315684 CNTN1Q12860 1018 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 CCINQ13939 588 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 CRY1Q16526 586 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 FAM182AQ5T1J6 154 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 EMBQ6PCB8 327 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 VN1R5Q7Z5H4 357 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 EXD1Q8NHP7 514 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 GLMNQ92990 594 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 AGXT2Q9BYV1 514 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 MINDY3Q9H8M7 445 aa9.15□□□□□ -0.94
CTC1-201ENST00000315684 RPN2P04844 631 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 RPA3P35244 121 aaPredicted RBP9.15□□□□□ -0.95
CTC1-201ENST00000315684 SERPINB9P50453 376 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 MPP3Q13368 585 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 CHST15Q7LFX5 561 aaPredicted RBP9.15□□□□□ -0.95
CTC1-201ENST00000315684 ZNF557Q8N988 423 aaPredicted RBP9.15□□□□□ -0.95
CTC1-201ENST00000315684 ZSCAN18Q8TBC5 510 aaPredicted RBP9.15□□□□□ -0.95
CTC1-201ENST00000315684 MCOLN3Q8TDD5 553 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 ECT2Q9H8V3 914 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 OSER1Q9NX31 292 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 L1RE1Q9UN81 338 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 DRG1Q9Y295 367 aaKnown RBP9.15□□□□□ -0.95
CTC1-201ENST00000315684 MYH13Q9UKX3 1938 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 TTC24A2A3L6 582 aaPredicted RBP9.15□□□□□ -0.95
CTC1-201ENST00000315684 HMGB1P1B2RPK0 211 aaPredicted RBP9.15□□□□□ -0.95
CTC1-201ENST00000315684 DDX3YO15523 660 aaKnown RBP9.15□□□□□ -0.95
CTC1-201ENST00000315684 SLC35G4P0C7Q5 338 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 PYGMP11217 842 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 NFKB1P19838 968 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 CLYBLQ8N0X4 340 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 SH2D3CQ8N5H7 860 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 LRRC52Q8N7C0 313 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 GFM2Q969S9 779 aaKnown RBP9.15□□□□□ -0.95
CTC1-201ENST00000315684 FAM111AQ96PZ2 611 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 BBS4Q96RK4 519 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 ARHGAP9Q9BRR9 750 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 XAB2Q9HCS7 855 aaKnown RBP9.15□□□□□ -0.95
CTC1-201ENST00000315684 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.15□□□□□ -0.95
CTC1-201ENST00000315684 DNPEPQ9ULA0 475 aa9.15□□□□□ -0.95
CTC1-201ENST00000315684 RARAP10276 462 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 SLC2A4P14672 509 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 C1orf146Q5VVC0 180 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 PHYKPLQ8IUZ5 450 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 SPATA6LQ8N4H0 392 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 EFCAB3Q8N7B9 438 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 LMLNQ96KR4 655 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 PRPF18Q99633 342 aaKnown RBP9.14□□□□□ -0.95
CTC1-201ENST00000315684 FAM167BQ9BTA0 163 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 THUMPD3Q9BV44 507 aaKnown RBP9.14□□□□□ -0.95
CTC1-201ENST00000315684 SCHIP1Q9P0W5 487 aaPredicted RBP9.14□□□□□ -0.95
CTC1-201ENST00000315684 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.14□□□□□ -0.95
CTC1-201ENST00000315684 TACR2P21452 398 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 SLC10A6Q3KNW5 377 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 ZNF280BQ86YH2 543 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 CLEC4CQ8WTT0 213 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 JSRP1Q96MG2 331 aaPredicted RBP9.14□□□□□ -0.95
CTC1-201ENST00000315684 FANCEQ9HB96 536 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 LRRC72A6NJI9 287 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 PPEF2O14830 753 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 SEC24DO94855 1032 aaPredicted RBP9.14□□□□□ -0.95
CTC1-201ENST00000315684 VIPP01282 170 aa9.14□□□□□ -0.95
CTC1-201ENST00000315684 CTSOP43234 321 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms