RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 DUSP4Q13115 394 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 POU6F1Q14863 301 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 DLG2Q15700 870 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 PCSK7Q16549 785 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 RNF19BQ6ZMZ0 732 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 ZSCAN18Q8TBC5 510 aaPredicted RBP12.67□□□□□ -0.38
RNF4-201ENST00000314289 TEKT5Q96M29 485 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 DEFB118Q96PH6 123 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 GBA3Q9H227 469 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 SMOC2Q9H3U7 446 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 SSU72Q9NP77 194 aaKnown RBP12.67□□□□□ -0.38
RNF4-201ENST00000314289 ARHGEF38Q9NXL2 777 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 LRFN2Q9ULH4 789 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 PLLPQ9Y342 182 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 SCN5AQ14524 2016 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 TBKBP1A7MCY6 615 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 LUC7L3O95232 432 aaKnown RBP12.67□□□□□ -0.38
RNF4-201ENST00000314289 CALRP27797 417 aaKnown RBP12.67□□□□□ -0.38
RNF4-201ENST00000314289 FAM189BP81408 668 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 CDK16Q00536 496 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 RNF43Q68DV7 783 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 DCP1BQ8IZD4 617 aaKnown RBP12.67□□□□□ -0.38
RNF4-201ENST00000314289 ACVR1CQ8NER5 493 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
RNF4-201ENST00000314289 CERS2Q96G23 380 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 PRR11Q96HE9 360 aaPredicted RBP12.67□□□□□ -0.38
RNF4-201ENST00000314289 KLHL5Q96PQ7 755 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 ACSS2Q9NR19 701 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 TMEM161AQ9NX61 479 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 BFARQ9NZS9 450 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 TXNDC16Q9P2K2 825 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 ZNF180Q9UJW8 692 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 CORO1CQ9ULV4 474 aaPredicted RBP12.67□□□□□ -0.38
RNF4-201ENST00000314289 CBX6O95503 412 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 MLNP12872 115 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 NMBRP28336 390 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 CHRNA4P43681 627 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 VEGFBP49765 207 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 SESN3P58005 492 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 TMPRSS15P98073 1019 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 NIPAL4Q0D2K0 466 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 TAF10Q12962 218 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 EIF4EBP2Q13542 120 aaPredicted RBP12.66□□□□□ -0.38
RNF4-201ENST00000314289 CHI3L2Q15782 390 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 ALFQ53S48 1182 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 FAM117BQ6P1L5 589 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 MTDHQ86UE4 582 aaKnown RBP12.66□□□□□ -0.38
RNF4-201ENST00000314289 BCL7CQ8WUZ0 217 aaPredicted RBP12.66□□□□□ -0.38
RNF4-201ENST00000314289 C10orf82Q8WW14 230 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 FBXO32Q969P5 355 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 C20orf27Q9GZN8 174 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 VPS11Q9H270 941 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 EIF2B3Q9NR50 452 aaKnown RBP12.66□□□□□ -0.38
RNF4-201ENST00000314289 MARCH5Q9NX47 278 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 PCDHB5Q9Y5E4 795 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 FAM237BA0A1B0GVD1 139 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 NCAM2O15394 837 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 ADAM12O43184 909 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 ALDH2P05091 517 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 ITGA2BP08514 1039 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 LINGO3P0C6S8 592 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 DHRS4L1P0CG22 281 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 PAPOLAP51003 745 aaKnown RBP12.66□□□□□ -0.38
RNF4-201ENST00000314289 BIRC2Q13490 618 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 C10orf120Q5SQS8 335 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 THEMIS2Q5TEJ8 643 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 RASIP1Q5U651 963 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 TTC16Q8NEE8 873 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 PXYLP1Q8TE99 480 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 CDKL2Q92772 493 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 CASD1Q96PB1 797 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 LRRC37BQ96QE4 947 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 NUDCD1Q96RS6 583 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 FBXO6Q9NRD1 293 aaPredicted RBP12.66□□□□□ -0.38
RNF4-201ENST00000314289 KANSL3Q9P2N6 904 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 FRMPD3Q5JV73 1810 aa12.66□□□□□ -0.38
RNF4-201ENST00000314289 SCAMP3O14828 347 aaKnown RBP12.65□□□□□ -0.38
RNF4-201ENST00000314289 MAFKO60675 156 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 PDE1CQ14123 709 aaPredicted RBP12.65□□□□□ -0.38
RNF4-201ENST00000314289 RAP1GAP2Q684P5 730 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 STEAP4Q687X5 459 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 KCTD11Q693B1 232 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 RGS9BPQ6ZS82 235 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 STRA8Q7Z7C7 330 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 LONP2Q86WA8 852 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 GRAMD1AQ96CP6 724 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 MYEOVQ96EZ4 313 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 OSBPL2Q9H1P3 480 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 CCSER2Q9H7U1 834 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 RNPEPL1Q9HAU8 725 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 C20orf96Q9NUD7 363 aaPredicted RBP12.65□□□□□ -0.38
RNF4-201ENST00000314289 RBM22Q9NW64 420 aaKnown RBP eCLIP12.65□□□□□ -0.381e-9■■■■■ 27.3
RNF4-201ENST00000314289 SQORQ9Y6N5 450 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 RANBP2P49792 3224 aaKnown RBP12.65□□□□□ -0.38
RNF4-201ENST00000314289 GJB3O75712 270 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 ALDH1A2O94788 518 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 GM2AP17900 193 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 RPL10AP62906 217 aaKnown RBP12.65□□□□□ -0.38
RNF4-201ENST00000314289 ITKQ08881 620 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 BST1Q10588 318 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms