RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 ADORA2BP29275 332 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 NR1H2P55055 460 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 MRPS22P82650 360 aaKnown RBP14.1□□□□□ -0.15
MKS1-201ENST00000313863 CREB5Q02930 508 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 LSM12Q3MHD2 195 aaKnown RBP14.1□□□□□ -0.15
MKS1-201ENST00000313863 TREML2Q5T2D2 321 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 ZNF772Q68DY9 489 aaPredicted RBP14.1□□□□□ -0.15
MKS1-201ENST00000313863 CES3Q6UWW8 571 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 KCNMB4Q86W47 210 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 IRGQQ8WZA9 623 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 GFM2Q969S9 779 aaKnown RBP14.1□□□□□ -0.15
MKS1-201ENST00000313863 OXCT2Q9BYC2 517 aaPredicted RBP14.1□□□□□ -0.15
MKS1-201ENST00000313863 SNX25Q9H3E2 840 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 TASP1Q9H6P5 420 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 GJA3Q9Y6H8 435 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 PDCD11Q14690 1871 aaKnown RBP14.1□□□□□ -0.15
MKS1-201ENST00000313863 ZCWPW2A0A1B0GU75 182 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 CCDC160A6NGH7 325 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 TRPC5OSA6NMA1 111 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 PSMD3O43242 534 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 DDHD2O94830 711 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 MPSTP25325 297 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 NOS2P35228 1153 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 GRIA4P48058 902 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 DPYSQ14117 519 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 KCTD2Q14681 263 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 UGP2Q16851 508 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 INTS6LQ5JSJ4 861 aaKnown RBP14.1□□□□□ -0.15
MKS1-201ENST00000313863 DEFB106AQ8N104 65 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 BHLHE22Q8NFJ8 381 aaPredicted RBP14.1□□□□□ -0.15
MKS1-201ENST00000313863 KBTBD7Q8WVZ9 684 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 TOP1MTQ969P6 601 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 RCN3Q96D15 328 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 ATXN7L3BQ96GX2 97 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 VPS39Q96JC1 886 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 ZNF385DQ9H6B1 395 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 C20orf96Q9NUD7 363 aaPredicted RBP14.1□□□□□ -0.15
MKS1-201ENST00000313863 SETD4Q9NVD3 440 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 UTP6Q9NYH9 597 aaKnown RBP14.1□□□□□ -0.15
MKS1-201ENST00000313863 NR2E3Q9Y5X4 410 aa14.1□□□□□ -0.15
MKS1-201ENST00000313863 PRSS51A0A1B0GVH4 220 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 E2F8A0AVK6 867 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 TRIM38O00635 465 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 NEMP1O14524 444 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 XPO1O14980 1071 aaKnown RBP14.09□□□□□ -0.15
MKS1-201ENST00000313863 VILLO15195 856 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 PIGNO95427 931 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 XRCC1P18887 633 aaPredicted RBP14.09□□□□□ -0.15
MKS1-201ENST00000313863 TFEBP19484 476 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 GNL1P36915 607 aaPredicted RBP14.09□□□□□ -0.15
MKS1-201ENST00000313863 MAPRE2Q15555 327 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 DALRD3Q5D0E6 543 aaKnown RBP14.09□□□□□ -0.15
MKS1-201ENST00000313863 PRAMEF18Q5VWM3 479 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 KLC3Q6P597 504 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 KLHDC10Q6PID8 442 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 ZNF410Q86VK4 478 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 FAM149B1Q96BN6 582 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 SCYL1Q96KG9 808 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 CNBD2Q96M20 576 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 SLC9A7Q96T83 725 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 VAT1Q99536 393 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 GPR22Q99680 433 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 MAGEB5Q9BZ81 275 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 ZCWPW1Q9H0M4 648 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 COPS7BQ9H9Q2 264 aaPredicted RBP14.09□□□□□ -0.15
MKS1-201ENST00000313863 ZBTB26Q9HCK0 441 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 FZD1Q9UP38 647 aa14.09□□□□□ -0.15
MKS1-201ENST00000313863 GNEQ9Y223 722 aaKnown RBP14.09□□□□□ -0.15
MKS1-201ENST00000313863 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.08□□□□□ -0.15
MKS1-201ENST00000313863 CFLARO15519 480 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 OR6B1O95007 311 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 ENO3P13929 434 aaPredicted RBP14.08□□□□□ -0.15
MKS1-201ENST00000313863 PTPN3P26045 913 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 KPNA2P52292 529 aaKnown RBP14.08□□□□□ -0.15
MKS1-201ENST00000313863 IRF9Q00978 393 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 SLC12A1Q13621 1099 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 LAMC2Q13753 1193 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 NADK2Q4G0N4 442 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 FBXO16Q8IX29 292 aaPredicted RBP14.08□□□□□ -0.15
MKS1-201ENST00000313863 AFAP1L2Q8N4X5 818 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 RIN3Q8TB24 985 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 AGR3Q8TD06 166 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 TNIP3Q96KP6 325 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 SNX27Q96L92 541 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 ZNF560Q96MR9 790 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 CAMKK2Q96RR4 588 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 CEP41Q9BYV8 373 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 GBA3Q9H227 469 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 RHOJQ9H4E5 214 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 WDR55Q9H6Y2 383 aaPredicted RBP14.08□□□□□ -0.15
MKS1-201ENST00000313863 LRRC4Q9HBW1 653 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 UBAP1Q9NZ09 502 aa14.08□□□□□ -0.15
MKS1-201ENST00000313863 DCLK1O15075 740 aa14.08□□□□□ -0.16
MKS1-201ENST00000313863 GRID2O43424 1007 aa14.08□□□□□ -0.16
MKS1-201ENST00000313863 CD4P01730 458 aa14.08□□□□□ -0.16
MKS1-201ENST00000313863 LTFP02788 710 aa14.08□□□□□ -0.16
MKS1-201ENST00000313863 VTNP04004 478 aa14.08□□□□□ -0.16
MKS1-201ENST00000313863 CYP2B6P20813 491 aa14.08□□□□□ -0.16
MKS1-201ENST00000313863 EPHA3P29320 983 aa14.08□□□□□ -0.16
MKS1-201ENST00000313863 PNPLA4P41247 253 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms