RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 MRGPRX3Q96LB0 322 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 BAG1Q99933 345 aaPredicted RBP20.29■□□□□ 0.84
VEGFB-201ENST00000309422 MKRN2Q9H000 416 aaKnown RBP20.29■□□□□ 0.84
VEGFB-201ENST00000309422 PRSS16Q9NQE7 514 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 HS3ST2Q9Y278 367 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 INVSQ9Y283 1065 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 TTC34A8MYJ7 566 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 BNIP3LO60238 219 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 ADH1BP00325 375 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 RETP07949 1114 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 SERPINB6P35237 376 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 KCNT1Q5JUK3 1230 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 FAM46CQ5VWP2 391 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 ASCL5Q7RTU5 278 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 KBTBD6Q86V97 674 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 SH2D3CQ8N5H7 860 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 FAM160A2Q8N612 972 aaPredicted RBP20.28■□□□□ 0.84
VEGFB-201ENST00000309422 SLC35G2Q8TBE7 412 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 RLN3Q8WXF3 142 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 PEBP4Q96S96 227 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 SLCO3A1Q9UIG8 710 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 OR51B4Q9Y5P0 310 aa20.28■□□□□ 0.84
VEGFB-201ENST00000309422 CXorf51AA0A1B0GTR3 108 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 ARHGAP42A6NI28 874 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 DCLK1O15075 740 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 ATP9BO43861 1147 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 FOXD2O60548 495 aaPredicted RBP20.27■□□□□ 0.84
VEGFB-201ENST00000309422 SNAP91O60641 907 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 CD6P30203 668 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 DHPSP49366 369 aaPredicted RBP20.27■□□□□ 0.84
VEGFB-201ENST00000309422 SERPINH1P50454 418 aaKnown RBP20.27■□□□□ 0.84
VEGFB-201ENST00000309422 COPAP53621 1224 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 CCDC15Q0P6D6 951 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 MESDQ14696 234 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 DLG2Q15700 870 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 DPYSL2Q16555 572 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 PLK5Q496M5 336 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 SPDYCQ5MJ68 293 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 LZTR1Q8N653 840 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 SUMF1Q8NBK3 374 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 OR52K2Q8NGK3 314 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 ANP32BQ92688 251 aaKnown RBP20.27■□□□□ 0.84
VEGFB-201ENST00000309422 ALG14Q96F25 216 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 ZC3H10Q96K80 434 aaKnown RBP20.27■□□□□ 0.84
VEGFB-201ENST00000309422 CALR3Q96L12 384 aaKnown RBP20.27■□□□□ 0.84
VEGFB-201ENST00000309422 KCTD15Q96SI1 283 aaPredicted RBP20.27■□□□□ 0.84
VEGFB-201ENST00000309422 CEP44Q9C0F1 390 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 SLC6A17Q9H1V8 727 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 DYRK4Q9NR20 520 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 PCDHGA5Q9Y5G8 931 aa20.27■□□□□ 0.84
VEGFB-201ENST00000309422 WASH4PA8MWX3 477 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 ALOX15BO15296 676 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 IL1BP01584 269 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 GOT1P17174 413 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 PSMD8P48556 350 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 NDST2P52849 883 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 SEMA3BQ13214 749 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 MAP7D1Q3KQU3 841 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 SYCP2LQ5T4T6 812 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 PMS2CLQ68D20 193 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 TMCO3Q6UWJ1 677 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 CYP2U1Q7Z449 544 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 KIAA1328Q86T90 577 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 FOXJ1Q92949 421 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 ARHGEF2Q92974 986 aaKnown RBP20.26■□□□□ 0.83
VEGFB-201ENST00000309422 MYO19Q96H55 970 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 PSMB7Q99436 277 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 OMDQ99983 421 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 RSPH9Q9H1X1 276 aaPredicted RBP20.26■□□□□ 0.83
VEGFB-201ENST00000309422 OSGEPQ9NPF4 335 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 PCDHA13Q9Y5I0 950 aa20.26■□□□□ 0.83
VEGFB-201ENST00000309422 EPN1Q9Y6I3 576 aaPredicted RBP20.26■□□□□ 0.83
VEGFB-201ENST00000309422 MEI4A8MW99 385 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 BUB1O43683 1085 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 SPOPO43791 374 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 NDUFA10O95299 355 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 RARAP10276 462 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 SRCP12931 536 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 SLC1A1P43005 524 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 HCAR3P49019 387 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 DNA2P51530 1060 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 TPMTP51580 245 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 NAP1L1P55209 391 aaKnown RBP20.25■□□□□ 0.83
VEGFB-201ENST00000309422 CDH6P55285 790 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 RPS14P62263 151 aaKnown RBP20.25■□□□□ 0.83
VEGFB-201ENST00000309422 CREB5Q02930 508 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 SLC25A11Q02978 314 aaKnown RBP20.25■□□□□ 0.83
VEGFB-201ENST00000309422 CST6Q15828 149 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 CA9Q16790 459 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 DAB2IPQ5VWQ8 1189 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 LYSMD4Q5XG99 296 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 C22orf39Q6P5X5 142 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 LINGO4Q6UY18 593 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 Q6ZVU0 165 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 MMAAQ8IVH4 418 aaKnown RBP20.25■□□□□ 0.83
VEGFB-201ENST00000309422 RYBPQ8N488 228 aaPredicted RBP20.25■□□□□ 0.83
VEGFB-201ENST00000309422 ARFGAP1Q8N6T3 406 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 PCDH20Q8N6Y1 951 aaKnown RBP20.25■□□□□ 0.83
VEGFB-201ENST00000309422 KCTD6Q8NC69 237 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 CASKIN2Q8WXE0 1202 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms