RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 IGLV3-25P01717 112 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 MBL2P11226 248 aaPredicted RBP8.49□□□□□ -1.05
CHD6-201ENST00000309279 PSMC3P17980 439 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 PBLDP30039 288 aaPredicted RBP8.49□□□□□ -1.05
CHD6-201ENST00000309279 MATKP42679 507 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 TNNT3P45378 269 aaPredicted RBP8.49□□□□□ -1.05
CHD6-201ENST00000309279 SOX9P48436 509 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 C21orf58P58505 322 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 COG7P83436 770 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 KCNC4Q03721 635 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 NNTQ13423 1086 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 OASLQ15646 514 aaKnown RBP8.49□□□□□ -1.05
CHD6-201ENST00000309279 ZNF77Q15935 545 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 FAM102AQ5T9C2 384 aaPredicted RBP8.49□□□□□ -1.05
CHD6-201ENST00000309279 ALKBH5Q6P6C2 394 aaKnown RBP8.49□□□□□ -1.05
CHD6-201ENST00000309279 VITQ6UXI7 678 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 CCDC170Q8IYT3 715 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 SLC7A5P1Q8MH63 180 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 DEFB106AQ8N104 65 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 LINC00469Q8N7U9 141 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 SPC24Q8NBT2 197 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 BPIFB1Q8TDL5 484 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 ADAMTS18Q8TE60 1221 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 RNF139Q8WU17 664 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 DEPDC1BQ8WUY9 529 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 CCDC42Q96M95 316 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 NECAB3Q96P71 396 aaPredicted RBP8.49□□□□□ -1.05
CHD6-201ENST00000309279 SPON2Q9BUD6 331 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 CRB3Q9BUF7 120 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 PLA2G2FQ9BZM2 168 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 SMG9Q9H0W8 520 aaKnown RBP8.49□□□□□ -1.05
CHD6-201ENST00000309279 SMOC2Q9H3U7 446 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 DNAAF2Q9NVR5 837 aaKnown RBP8.49□□□□□ -1.05
CHD6-201ENST00000309279 MARCH2Q9P0N8 246 aa8.49□□□□□ -1.05
CHD6-201ENST00000309279 ZC3H7BQ9UGR2 993 aaKnown RBP8.49□□□□□ -1.05
CHD6-201ENST00000309279 KRBA1A5PL33 1030 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 LEFTY2O00292 366 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 CAPN9O14815 690 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 SMAD7O15105 426 aaKnown RBP8.48□□□□□ -1.05
CHD6-201ENST00000309279 MDM4O15151 490 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 ZBTB14O43829 449 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 DAB1O75553 588 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 GRAP2O75791 330 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 LCA5LO95447 670 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 ASGR2P07307 311 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 MYBL1P10243 752 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 KRT3P12035 628 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 GRK6P43250 576 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 KPNA1P52294 538 aaPredicted RBP8.48□□□□□ -1.05
CHD6-201ENST00000309279 GSDMDP57764 484 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 GFPT1Q06210 699 aaPredicted RBP8.48□□□□□ -1.05
CHD6-201ENST00000309279 RING1Q06587 406 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 EFEMP1Q12805 493 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 USP4Q13107 963 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 MAMLD1Q13495 774 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 TDGQ13569 410 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 NAA30Q147X3 362 aaPredicted RBP8.48□□□□□ -1.05
CHD6-201ENST00000309279 DCAF6Q58WW2 860 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 MEI1Q5TIA1 1274 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 PLEKHA7Q6IQ23 1121 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 POMZP3Q6PJE2 187 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 HTR3DQ70Z44 454 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 BNIPLQ7Z465 357 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 TMTC1Q8IUR5 882 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 ZNF619Q8N2I2 560 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 SPERTQ8NA61 448 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 ST13P5Q8NFI4 369 aaPredicted RBP8.48□□□□□ -1.05
CHD6-201ENST00000309279 DQX1Q8TE96 717 aaKnown RBP8.48□□□□□ -1.05
CHD6-201ENST00000309279 SH3RF2Q8TEC5 729 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 CCDC114Q96M63 670 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 UHRF1Q96T88 793 aaPredicted RBP8.48□□□□□ -1.05
CHD6-201ENST00000309279 NPY6RQ99463 290 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 KXD1Q9BQD3 176 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 FAM83CQ9BQN1 747 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 DDX23Q9BUQ8 820 aaKnown RBP8.48□□□□□ -1.05
CHD6-201ENST00000309279 LUC7LQ9NQ29 371 aaKnown RBP8.48□□□□□ -1.05
CHD6-201ENST00000309279 GKN1Q9NS71 199 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 HPF1Q9NWY4 346 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 UBAP1Q9NZ09 502 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 SH3BGRL2Q9UJC5 107 aa8.48□□□□□ -1.05
CHD6-201ENST00000309279 HBS1LQ9Y450 684 aaKnown RBP8.48□□□□□ -1.05
CHD6-201ENST00000309279 LRRC72A6NJI9 287 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 C2CD4BA6NLJ0 364 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 GOLGA8SH3BPF8 625 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 ARNTLO00327 626 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 CHADO15335 359 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 FZD6O60353 706 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 BRINP1O60477 761 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 ZNF254O75437 659 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 STC2O76061 302 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 IGLV3-27P01718 113 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 FBXO45P0C2W1 286 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 RFC1P35251 1148 aaPredicted RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 MTF1Q14872 753 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 NR6A1Q15406 480 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 TRIP4Q15650 581 aaPredicted RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 PPP2R5EQ16537 467 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 SLC25A52Q3SY17 297 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 ARHGAP29Q52LW3 1261 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 TTC19Q6DKK2 380 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms