RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 UBP1Q9NZI7 540 aa11.36□□□□□ -0.59
PTPN7-201ENST00000309017 AURKCQ9UQB9 309 aa11.36□□□□□ -0.59
PTPN7-201ENST00000309017 HES2Q9Y543 173 aa11.36□□□□□ -0.59
PTPN7-201ENST00000309017 GMEB1Q9Y692 573 aa11.36□□□□□ -0.59
PTPN7-201ENST00000309017 ALDH1A2O94788 518 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 FARP2O94887 1054 aaPredicted RBP11.35□□□□□ -0.59
PTPN7-201ENST00000309017 MT-CO1P00395 513 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 MPOP05164 745 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 SULT1E1P49888 294 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 LIMK2P53671 638 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 STEAP4Q687X5 459 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 GPR141Q7Z602 305 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 KBTBD7Q8WVZ9 684 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 MYOZ2Q9NPC6 264 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 KCNU1A8MYU2 1149 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 ZSCAN9O15535 394 aaPredicted RBP11.35□□□□□ -0.59
PTPN7-201ENST00000309017 TIMM44O43615 452 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 PSME3P61289 254 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 POU5F1BQ06416 359 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 MTX3Q5HYI7 312 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 NCBP2-AS2Q69YL0 99 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 KCNMB4Q86W47 210 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 ARNTL2Q8WYA1 636 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 VPS39Q96JC1 886 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 ZNF512Q96ME7 567 aaPredicted RBP11.35□□□□□ -0.59
PTPN7-201ENST00000309017 OMDQ99983 421 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 LPIN3Q9BQK8 851 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 UPF3AQ9H1J1 476 aaKnown RBP11.35□□□□□ -0.59
PTPN7-201ENST00000309017 CCDC167Q9P0B6 97 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 NRXN2Q9P2S2 1712 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 SAC3D1A6NKF1 404 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 MATN2O00339 956 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 TRIM38O00635 465 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 H2AFYO75367 372 aaKnown RBP11.35□□□□□ -0.59
PTPN7-201ENST00000309017 GLDCP23378 1020 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 ATICP31939 592 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 TARBP2Q15633 366 aaKnown RBP11.35□□□□□ -0.59
PTPN7-201ENST00000309017 DPYSL2Q16555 572 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 DCAF6Q58WW2 860 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 KLHL35Q6PF15 583 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 ZBTB46Q86UZ6 589 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 TTC30AQ86WT1 665 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 RNF135Q8IUD6 432 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 RBM12BQ8IXT5 1001 aaKnown RBP11.35□□□□□ -0.59
PTPN7-201ENST00000309017 NUP93Q8N1F7 819 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 FAM47BQ8NA70 645 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 KCTD4Q8WVF5 259 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 FCRL3Q96P31 734 aaPredicted RBP11.35□□□□□ -0.59
PTPN7-201ENST00000309017 PLEKHG4BQ96PX9 1271 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 MINDY3Q9H8M7 445 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 TRPC7Q9HCX4 862 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 ZDHHC2Q9UIJ5 367 aa11.35□□□□□ -0.59
PTPN7-201ENST00000309017 BCAS2O75934 225 aaPredicted RBP11.34□□□□□ -0.59
PTPN7-201ENST00000309017 H6PDO95479 791 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 STT3AP46977 705 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 SLC12A2P55011 1212 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 MGAT5BQ3V5L5 792 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 NBPF12Q5TAG4 269 aaPredicted RBP11.34□□□□□ -0.59
PTPN7-201ENST00000309017 LIPMQ5VYY2 423 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 TTC33Q6PID6 262 aaPredicted RBP11.34□□□□□ -0.59
PTPN7-201ENST00000309017 PATL1Q86TB9 770 aaKnown RBP11.34□□□□□ -0.59
PTPN7-201ENST00000309017 SNX31Q8N9S9 440 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 NOL11Q9H8H0 719 aaKnown RBP11.34□□□□□ -0.59
PTPN7-201ENST00000309017 RNF19AQ9NV58 838 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 ADAM28Q9UKQ2 775 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 KIAA1257Q9ULG3 409 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 RNF103-CHMP3A0A140T963 221 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 TMEM233B4DJY2 109 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 G3V2L1 256 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 PRKCGP05129 697 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 TNFAIP2Q03169 654 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 KCTD21Q4G0X4 260 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 AGKQ53H12 422 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 CERCAMQ5T4B2 595 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 CYS1Q717R9 158 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 ZNF567Q8N184 647 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 APBA2Q99767 749 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 OSBPL11Q9BXB4 747 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 CEPT1Q9Y6K0 416 aa11.34□□□□□ -0.59
PTPN7-201ENST00000309017 NOL3O60936 208 aaKnown RBP11.33□□□□□ -0.59
PTPN7-201ENST00000309017 DDHD2O94830 711 aa11.33□□□□□ -0.59
PTPN7-201ENST00000309017 CKMT2P17540 419 aa11.33□□□□□ -0.59
PTPN7-201ENST00000309017 PRPSAP1Q14558 356 aa11.33□□□□□ -0.59
PTPN7-201ENST00000309017 Q3C1V9 767 aa11.33□□□□□ -0.59
PTPN7-201ENST00000309017 POTEHQ6S545 545 aa11.33□□□□□ -0.59
PTPN7-201ENST00000309017 KRT27Q7Z3Y8 459 aa11.33□□□□□ -0.59
PTPN7-201ENST00000309017 ERI1Q8IV48 349 aaKnown RBP11.33□□□□□ -0.59
PTPN7-201ENST00000309017 HERC6Q8IVU3 1022 aa11.33□□□□□ -0.59
PTPN7-201ENST00000309017 FLAD1Q8NFF5 587 aa11.33□□□□□ -0.59
PTPN7-201ENST00000309017 GRIN3AQ8TCU5 1115 aa11.33□□□□□ -0.59
PTPN7-201ENST00000309017 PBXIP1Q96AQ6 731 aa11.33□□□□□ -0.59
PTPN7-201ENST00000309017 GMLQ99445 158 aa11.33□□□□□ -0.59
PTPN7-201ENST00000309017 PAIP1Q9H074 479 aaKnown RBP11.33□□□□□ -0.59
PTPN7-201ENST00000309017 RBM38Q9H0Z9 239 aaKnown RBP11.33□□□□□ -0.59
PTPN7-201ENST00000309017 IL1RL2Q9HB29 575 aa11.33□□□□□ -0.59
PTPN7-201ENST00000309017 CYP4F12Q9HCS2 524 aa11.33□□□□□ -0.59
PTPN7-201ENST00000309017 TMPRSS4Q9NRS4 437 aa11.33□□□□□ -0.59
PTPN7-201ENST00000309017 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.33□□□□□ -0.59
PTPN7-201ENST00000309017 PAIP2BQ9ULR5 123 aaKnown RBP11.33□□□□□ -0.59
PTPN7-201ENST00000309017 KIAA1217Q5T5P2 1943 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms