RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 GNPTGQ9UJJ9 305 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ZNFX1Q9P2E3 1918 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 EEF2KO00418 725 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 RIPK2O43353 540 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 KCNJ13O60928 360 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 KRT36O76013 467 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 FTH1P02794 183 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 NCAM1P13591 858 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 DDX6P26196 483 aaKnown RBP eCLIP4.08□□□□□ -1.76
USH2A-201ENST00000307340 TARSP26639 723 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 IL2P60568 153 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 IQSEC1Q6DN90 963 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CASP12Q6UXS9 341 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 GADL1Q6ZQY3 521 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 PID1Q7Z2X4 250 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 LRRC47Q8N1G4 583 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 ZNF599Q96NL3 588 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 GPR88Q9GZN0 384 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 UNC45AQ9H3U1 944 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 NGRNQ9NPE2 291 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 DFNA5O60443 496 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CBSLP0DN79 551 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 TPSB2P20231 275 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 KELP23276 732 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CBSP35520 551 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 GNL1P36915 607 aaPredicted RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 YWHAZP63104 245 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 PITPNAQ00169 270 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 TPSAB1Q15661 275 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 DEPDC1Q5TB30 811 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 MPZL3Q6UWV2 235 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 NEUROD4Q9HD90 331 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 MKLN1Q9UL63 735 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 SENP3-EIF4A1A0A087X0R7 540 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 PROSCO94903 275 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 MYCNP04198 464 aaPredicted RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 TRIM49P0CI25 452 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 TRIM49CP0CI26 452 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ITGALP20701 1170 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 IL12RB1P42701 662 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 POLE2P56282 527 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 SFRP1Q8N474 314 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 COLEC11Q9BWP8 271 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 DENND2DQ9H6A0 471 aaPredicted RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 TBCCD1Q9NVR7 557 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 HDAC3O15379 428 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 XYLBO75191 536 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 LRG1P02750 347 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 TCF4P15884 667 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 VPS41P49754 854 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ARL6IP1Q15041 203 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 SMU1Q2TAY7 513 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 FAM133BQ5BKY9 247 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 MARC1Q5VT66 337 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ANGEL2Q5VTE6 544 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 CATSPER3Q86XQ3 398 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CACTIN-AS1Q8N1I8 211 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 MYLPFQ96A32 169 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 PSKH2Q96QS6 385 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 NOD2Q9HC29 1040 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 FKBP14Q9NWM8 211 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 TAS2R1Q9NYW7 299 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 LOC100653049A0A140TA62 436 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ASNA1O43681 348 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ARHGAP22Q7Z5H3 698 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 TDRD5Q8NAT2 981 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 GPKOWQ92917 476 aaPredicted RBP eCLIP4.08□□□□□ -1.76
USH2A-201ENST00000307340 PCDHGC3Q9UN70 934 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 PCDHA11Q9Y5I1 949 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CAMTA2O94983 1202 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ENO2P09104 434 aaPredicted RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 ACLYP53396 1101 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 PKP1Q13835 747 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CXXC5Q7LFL8 322 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 TRIB3Q96RU7 358 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CGRRF1Q99675 332 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 MYL10Q9BUA6 226 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ZFYVE28Q9HCC9 887 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 TMEM161AQ9NX61 479 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CYP39A1Q9NYL5 469 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CKLFQ9UBR5 152 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CNOT11Q9UKZ1 510 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 SLC9A8Q9Y2E8 581 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 PTCH2Q9Y6C5 1203 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ZNF536O15090 1300 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 MYO9BQ13459 2157 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 NPIPA7E9PJI5 369 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 SERPINA3P01011 423 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 NPIPA8P0DM63 369 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CPA1P15085 419 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 FECHP22830 423 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 SQLEQ14534 574 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ANXA8L1Q5VT79 327 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 BAIAP2L2Q6UXY1 529 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 KCTD1Q719H9 257 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 LDHDQ86WU2 507 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 MGARPQ8TDB4 240 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 FAM84BQ96KN1 310 aaPredicted RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 SPATA13Q96N96 652 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms