RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 TEX28O15482 410 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 USP12O75317 370 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 STBD1O95210 358 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 TBX18O95935 607 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 UGT2B4P06133 528 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 IFNA8P32881 189 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 ABL2P42684 1182 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 MPP3Q13368 585 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 AUHQ13825 339 aaKnown RBP9.42□□□□□ -0.9
PTPRE-202ENST00000306042 ANKRD20A2Q5SQ80 823 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 SH2D4BQ5SQS7 431 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 ANKRD20A1Q5TYW2 823 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 NPNTQ6UXI9 565 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 SAE1Q9UBE0 346 aaPredicted RBP9.42□□□□□ -0.9
PTPRE-202ENST00000306042 HMGXB4Q9UGU5 601 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 PAPPA2Q9BXP8 1791 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 PAPSS1O43252 624 aaPredicted RBP9.42□□□□□ -0.9
PTPRE-202ENST00000306042 RHOP08100 348 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 ADH5P11766 374 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 NFKB1P19838 968 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 PTPN9P43378 593 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 GNA12Q03113 381 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 ELP6Q0PNE2 266 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 FAAP100Q0VG06 881 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 TCEA2Q15560 299 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 DBN1Q16643 649 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 LONRF1Q17RB8 773 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 TEKT4Q8WW24 435 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 CRYGNQ8WXF5 182 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 ZMAT2Q96NC0 199 aaKnown RBP9.42□□□□□ -0.9
PTPRE-202ENST00000306042 KLHL5Q96PQ7 755 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 PRRX2Q99811 253 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 PIH1D1Q9NWS0 290 aaKnown RBP9.42□□□□□ -0.9
PTPRE-202ENST00000306042 WHRNQ9P202 907 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 DYRK1BQ9Y463 629 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 GPSM3Q9Y4H4 160 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 RAD54BQ9Y620 910 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 SPACA6W5XKT8 324 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 A0A0G2JND7 137 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 HAS3O00219 553 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 DIAPH2O60879 1101 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 HOXA11P31270 313 aaPredicted RBP9.42□□□□□ -0.9
PTPRE-202ENST00000306042 MAGEA10P43363 369 aaPredicted RBP9.42□□□□□ -0.9
PTPRE-202ENST00000306042 MAGEA11P43364 429 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 RAP1GDS1P52306 607 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 FAM47EQ6ZV65 393 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 STRA8Q7Z7C7 330 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 PSTKQ8IV42 348 aaKnown RBP9.42□□□□□ -0.9
PTPRE-202ENST00000306042 MMGT1Q8N4V1 131 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 CCDC197Q8NCU1 140 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 CDCA3Q99618 268 aaPredicted RBP9.42□□□□□ -0.9
PTPRE-202ENST00000306042 BCO2Q9BYV7 579 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 CCSER2Q9H7U1 834 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 COG4Q9H9E3 785 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 ABCB8Q9NUT2 735 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 TDRKHQ9Y2W6 561 aaKnown RBP9.42□□□□□ -0.9
PTPRE-202ENST00000306042 ADAMTS7Q9UKP4 1686 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 PMM2O15305 246 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 VAPBO95292 243 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 ASLP04424 464 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 CTSAP10619 480 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 AMD1P17707 334 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 SUZ12Q15022 739 aaKnown RBP9.41□□□□□ -0.9
PTPRE-202ENST00000306042 PLEKHA7Q6IQ23 1121 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 OSTM1Q86WC4 334 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 FUKQ8N0W3 1084 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 SLC22A17Q8WUG5 538 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 TOP1MTQ969P6 601 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 ACDQ96AP0 544 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 SGF29Q96ES7 293 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 DTNBP1Q96EV8 351 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 PNKPQ96T60 521 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 ABCG4Q9H172 646 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 MAGEH1Q9H213 219 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 VCXQ9H320 206 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 ASB8Q9H765 288 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 TRIM45Q9H8W5 580 aaPredicted RBP9.41□□□□□ -0.9
PTPRE-202ENST00000306042 PCDH18Q9HCL0 1135 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 CLIC5Q9NZA1 410 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.41□□□□□ -0.9
PTPRE-202ENST00000306042 ZNHIT2Q9UHR6 403 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 GRID1Q9ULK0 1009 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 TRIM33Q9UPN9 1127 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 STARD13Q9Y3M8 1113 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 HOXB8P17481 243 aaPredicted RBP9.41□□□□□ -0.9
PTPRE-202ENST00000306042 PSMB4P28070 264 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 MAPKAPK2P49137 400 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 GPR15P49685 360 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 C11orf96Q7Z7L8 435 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 SYTL1Q8IYJ3 562 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 PRCCQ92733 491 aaPredicted RBP9.41□□□□□ -0.9
PTPRE-202ENST00000306042 EPC1Q9H2F5 836 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 COPS7BQ9H9Q2 264 aaPredicted RBP9.41□□□□□ -0.9
PTPRE-202ENST00000306042 TMPRSS4Q9NRS4 437 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 PCDHA11Q9Y5I1 949 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 NCANO14594 1321 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 MGAT1P26572 445 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 CDK18Q07002 472 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 SLC20A2Q08357 652 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 MGAT5Q09328 741 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms