RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 KCTD15Q96SI1 283 aaPredicted RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 TBCCD1Q9NVR7 557 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 TMEM181Q9P2C4 612 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 IGSF9Q9P2J2 1179 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 PRPF19Q9UMS4 504 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 USTQ9Y2C2 406 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 VWA8A3KMH1 1905 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 ASPDHA6ND91 283 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 LACTBL1A8MY62 500 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 CPNE6O95741 557 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 FYNP06241 537 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 IDO1P14902 403 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 PAX3P23760 479 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 YY1P25490 414 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 HOXC13P31276 330 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 ATXN1P54253 815 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 OLIG2Q13516 323 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 TMEM259Q4ZIN3 620 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 C6orf52Q5T4I8 152 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 N4BP2L1Q5TBK1 243 aaPredicted RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 XAF1Q6GPH4 301 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 GPR180Q86V85 440 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 ERI1Q8IV48 349 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 CPXCR1Q8N123 301 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 PDCD7Q8N8D1 485 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 MFSD2AQ8NA29 543 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 FBLIM1Q8WUP2 373 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 NTAN1Q96AB6 310 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 GCNAQ96QF7 691 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 MPHOSPH6Q99547 160 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 CLSTN3Q9BQT9 956 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 TDRD1Q9BXT4 1180 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 BRD8Q9H0E9 1235 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 TUT1Q9H6E5 874 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 TUBGCP4Q9UGJ1 667 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 AP4B1Q9Y6B7 739 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 SH3PXD2BA1X283 911 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 TTC24A2A3L6 582 aaPredicted RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 SPECC1L-ADORA2AF8WAN1 911 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 STX16-NPEPL1H3BU86 382 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 FXYD1O00168 92 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 GABRDO14764 452 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 DCLK1O15075 740 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 PAPSS1O43252 624 aaPredicted RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 PRSS23O95084 383 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 SERPINE1P05121 402 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 HTR1AP08908 422 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 WARSP23381 471 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 PMLP29590 882 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 LRPAP1P30533 357 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 STT3AP46977 705 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 CDH8P55286 799 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 RPL10AP62906 217 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 LAMC2Q13753 1193 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 IKBKEQ14164 716 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 PYCR3Q53H96 274 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 TCHHL1Q5QJ38 904 aaPredicted RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 SYCP2LQ5T4T6 812 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 PDPK2PQ6A1A2 396 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 DPH6Q7L8W6 267 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 SPRED1Q7Z699 444 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 FUNDC1Q8IVP5 155 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 DSELQ8IZU8 1212 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 ANKFN1Q8N957 763 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 PAPD5Q8NDF8 572 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 PPP4R1Q8TF05 950 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 ISG20Q96AZ6 181 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 HSFY1Q96LI6 401 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 TSGA13Q96PP4 275 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 RBBP8Q99708 897 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 NAT9Q9BTE0 207 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 MLPHQ9BV36 600 aaPredicted RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 SNRNP25Q9BV90 132 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 PDGFDQ9GZP0 370 aaPredicted RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 POLR3BQ9NW08 1133 aaPredicted RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 PKD2L1Q9P0L9 805 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 MARCOQ9UEW3 520 aaPredicted RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 ZDHHC2Q9UIJ5 367 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 GNEQ9Y223 722 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 TDRD15B5MCY1 1934 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 CCDC195A0A1B0GUA6 201 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 ASB14A6NK59 587 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 COPEO14579 308 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 ATE1O95260 518 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 CHRNGP07510 517 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 NFICP08651 508 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 STAG3L1P0CL83 205 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 P4HA1P13674 534 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 DNAJB2P25686 324 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 PSMA2P25787 234 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 ADSLP30566 484 aaPredicted RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 HOXA11P31270 313 aaPredicted RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 PHKA2P46019 1235 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 ERFP50548 548 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 RBP5P82980 135 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 NRG1Q02297 640 aaPredicted RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 GRSF1Q12849 480 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS50-202ENST00000305866 ILF2Q12905 390 aaKnown RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 BBS9Q3SYG4 887 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 AFMIDQ63HM1 303 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms