RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 HDAC11Q96DB2 347 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 C2orf49Q9BVC5 232 aaPredicted RBP27.73■■■□□ 2.03
HDAC3-201ENST00000305264 C10orf88Q9H8K7 445 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 RNF14Q9UBS8 474 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 IPO11Q9UI26 975 aaKnown RBP27.73■■■□□ 2.03
HDAC3-201ENST00000305264 BDP1A6H8Y1 2624 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 KRIT1O00522 736 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 ZMPSTE24O75844 475 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 CD72P21854 359 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 GRIA2P42262 883 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 ARF5P84085 180 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 DMC1Q14565 340 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 LEKR1Q6ZMV7 388 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 CCNYQ8ND76 341 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 SORCS1Q8WY21 1168 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 EZH1Q92800 747 aaPredicted RBP27.73■■■□□ 2.03
HDAC3-201ENST00000305264 CIPCQ9C0C6 399 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 FBXL21Q9UKT6 434 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 DNPEPQ9ULA0 475 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 ACTL7AQ9Y615 435 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 TBC1D3BA6NDS4 549 aa27.72■■■□□ 2.03
HDAC3-201ENST00000305264 PPP1R12AO14974 1030 aaPredicted RBP27.72■■■□□ 2.03
HDAC3-201ENST00000305264 MCF2LO15068 1137 aa27.72■■■□□ 2.03
HDAC3-201ENST00000305264 NCAM2O15394 837 aa27.72■■■□□ 2.03
HDAC3-201ENST00000305264 KDELR3O43731 214 aa27.72■■■□□ 2.03
HDAC3-201ENST00000305264 APODP05090 189 aa27.72■■■□□ 2.03
HDAC3-201ENST00000305264 PAFAH1B1P43034 410 aa27.72■■■□□ 2.03
HDAC3-201ENST00000305264 LINGO4Q6UY18 593 aa27.72■■■□□ 2.03
HDAC3-201ENST00000305264 SLC35B2Q8TB61 432 aa27.72■■■□□ 2.03
HDAC3-201ENST00000305264 MSANTD3Q96H12 275 aa27.72■■■□□ 2.03
HDAC3-201ENST00000305264 UHRF1Q96T88 793 aaPredicted RBP27.72■■■□□ 2.03
HDAC3-201ENST00000305264 SP110Q9HB58 689 aa27.72■■■□□ 2.03
HDAC3-201ENST00000305264 PDFQ9HBH1 243 aa27.72■■■□□ 2.03
HDAC3-201ENST00000305264 WNT16Q9UBV4 365 aa27.72■■■□□ 2.03
HDAC3-201ENST00000305264 KRBA1A5PL33 1030 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 ANTXRLA6NF34 631 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 LIASO43766 372 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 RBP3P10745 1247 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 PPIDQ08752 370 aaKnown RBP27.71■■■□□ 2.03
HDAC3-201ENST00000305264 SNX1Q13596 522 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 TMEM196Q5HYL7 178 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 TTC17Q96AE7 1141 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 QKIQ96PU8 341 aaKnown RBP eCLIP27.71■■■□□ 2.03
HDAC3-201ENST00000305264 HPCAL4Q9UM19 191 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 MUC22E2RYF6 1773 aaPredicted RBP27.71■■■□□ 2.03
HDAC3-201ENST00000305264 H7C0C1 242 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 PRAMEF11O60813 436 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 VAV1P15498 845 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 POLR2EP19388 210 aaKnown RBP27.71■■■□□ 2.03
HDAC3-201ENST00000305264 ATP5OP48047 213 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 AP1B1Q10567 949 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 PRKD1Q15139 912 aaPredicted RBP27.71■■■□□ 2.03
HDAC3-201ENST00000305264 PREPLQ4J6C6 727 aaPredicted RBP27.71■■■□□ 2.03
HDAC3-201ENST00000305264 FSTL4Q6MZW2 842 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 SUGP1Q8IWZ8 645 aaKnown RBP27.71■■■□□ 2.03
HDAC3-201ENST00000305264 CYB5D2Q8WUJ1 264 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 FAM3CQ92520 227 aa27.71■■■□□ 2.03
HDAC3-201ENST00000305264 XRCC4Q13426 336 aa27.7■■■□□ 2.03
HDAC3-201ENST00000305264 FAM182AQ5T1J6 154 aa27.7■■■□□ 2.03
HDAC3-201ENST00000305264 LRRC49Q8IUZ0 686 aa27.7■■■□□ 2.03
HDAC3-201ENST00000305264 TFB1MQ8WVM0 346 aaKnown RBP27.7■■■□□ 2.03
HDAC3-201ENST00000305264 ACDQ96AP0 544 aa27.7■■■□□ 2.03
HDAC3-201ENST00000305264 TSGA13Q96PP4 275 aa27.7■■■□□ 2.03
HDAC3-201ENST00000305264 ELOVL2Q9NXB9 296 aa27.7■■■□□ 2.03
HDAC3-201ENST00000305264 EGFP01133 1207 aa27.69■■■□□ 2.02
HDAC3-201ENST00000305264 STK19P49842 368 aaPredicted RBP27.69■■■□□ 2.02
HDAC3-201ENST00000305264 CCNG2Q16589 344 aa27.69■■■□□ 2.02
HDAC3-201ENST00000305264 SLC45A4Q5BKX6 768 aa27.69■■■□□ 2.02
HDAC3-201ENST00000305264 RPL10LQ96L21 214 aaKnown RBP27.69■■■□□ 2.02
HDAC3-201ENST00000305264 A0A0A0MRY4 1105 aa27.69■■■□□ 2.02
HDAC3-201ENST00000305264 CD160O95971 181 aa27.69■■■□□ 2.02
HDAC3-201ENST00000305264 PEX11BO96011 259 aa27.69■■■□□ 2.02
HDAC3-201ENST00000305264 MT-CO1P00395 513 aa27.69■■■□□ 2.02
HDAC3-201ENST00000305264 IL10RBQ08334 325 aa27.69■■■□□ 2.02
HDAC3-201ENST00000305264 EIF4HQ15056 248 aaKnown RBP27.69■■■□□ 2.02
HDAC3-201ENST00000305264 OASLQ15646 514 aaKnown RBP27.69■■■□□ 2.02
HDAC3-201ENST00000305264 WHAMMP3Q1A5X7 153 aa27.69■■■□□ 2.02
HDAC3-201ENST00000305264 CCDC13Q8IYE1 715 aa27.69■■■□□ 2.02
HDAC3-201ENST00000305264 SIX5Q8N196 739 aa27.69■■■□□ 2.02
HDAC3-201ENST00000305264 FRMD8P1Q9BZ68 369 aaPredicted RBP27.69■■■□□ 2.02
HDAC3-201ENST00000305264 TTC28Q96AY4 2481 aa27.69■■■□□ 2.02
HDAC3-201ENST00000305264 MYO18AQ92614 2054 aaKnown RBP27.68■■■□□ 2.02
HDAC3-201ENST00000305264 GOLGA6L10A0A0M3HER8 536 aa27.68■■■□□ 2.02
HDAC3-201ENST00000305264 K7EQS6 105 aa27.68■■■□□ 2.02
HDAC3-201ENST00000305264 CCNCP24863 283 aa27.68■■■□□ 2.02
HDAC3-201ENST00000305264 ECT2LQ008S8 904 aa27.68■■■□□ 2.02
HDAC3-201ENST00000305264 PRKCQQ04759 706 aa27.68■■■□□ 2.02
HDAC3-201ENST00000305264 BYSLQ13895 437 aaKnown RBP27.68■■■□□ 2.02
HDAC3-201ENST00000305264 NKD2Q969F2 451 aaPredicted RBP27.68■■■□□ 2.02
HDAC3-201ENST00000305264 ZNF419Q96HQ0 510 aaPredicted RBP27.68■■■□□ 2.02
HDAC3-201ENST00000305264 BRD8Q9H0E9 1235 aa27.68■■■□□ 2.02
HDAC3-201ENST00000305264 HCN2Q9UL51 889 aa27.68■■■□□ 2.02
HDAC3-201ENST00000305264 ATG2BQ96BY7 2078 aa27.68■■■□□ 2.02
HDAC3-201ENST00000305264 HACD1B0YJ81 288 aa27.68■■■□□ 2.02
HDAC3-201ENST00000305264 KCNK1O00180 336 aa27.68■■■□□ 2.02
HDAC3-201ENST00000305264 RBL1P28749 1068 aa27.68■■■□□ 2.02
HDAC3-201ENST00000305264 SULT2A1Q06520 285 aa27.68■■■□□ 2.02
HDAC3-201ENST00000305264 GRSF1Q12849 480 aaKnown RBP eCLIP27.68■■■□□ 2.02
HDAC3-201ENST00000305264 CYP1B1Q16678 543 aa27.68■■■□□ 2.02
HDAC3-201ENST00000305264 PTPRNQ16849 979 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms