RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 SMC1BQ8NDV3 1235 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 OR10T2Q8NGX3 314 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 RDH11Q8TC12 318 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 ATP2A3Q93084 1043 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 FAM149B1Q96BN6 582 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 VAT1Q99536 393 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 TBL1YQ9BQ87 522 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 ACBD6Q9BR61 282 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 ATP13A1Q9HD20 1204 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 OR12D3Q9UGF7 316 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 CORO1CQ9ULV4 474 aaPredicted RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 TIMM13Q9Y5L4 95 aaPredicted RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 KCNU1A8MYU2 1149 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 KCNK1O00180 336 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 SORBS2O94875 1100 aaKnown RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 C6orf222P0C671 652 aaPredicted RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 GLDCP23378 1020 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 CCNCP24863 283 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 ARCN1P48444 511 aaKnown RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 ACTR3P61158 418 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 CCNIQ14094 377 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 VWA5B1Q5TIE3 1220 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 OTOP3Q7RTS5 596 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 ZNF683Q8IZ20 524 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 ZNF781Q8N8C0 355 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 SCG3Q8WXD2 468 aaKnown RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 GPR22Q99680 433 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 CHRAC1Q9NRG0 131 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 OSER1Q9NX31 292 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 ZFATQ9P243 1243 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 KLHL8Q9P2G9 620 aaPredicted RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 DNAJB4Q9UDY4 337 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 SLC7A8Q9UHI5 535 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 WASF2Q9Y6W5 498 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 SCN8AQ9UQD0 1980 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 OBSL1O75147 1896 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 H0Y3Z8 333 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 TNFRSF10BO14763 440 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 USP12O75317 370 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 LRIG2O94898 1065 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 THP07101 528 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 LINGO3P0C6S8 592 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 RALBP11234 206 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 GABRB3P28472 473 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 TUBP50607 506 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 IRX4P78413 519 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 PAXIP1Q6ZW49 1069 aaPredicted RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 PID1Q7Z2X4 250 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 ACTRT2Q8TDY3 377 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 GPR78Q96P69 363 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 TREX1Q9NSU2 369 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 COL4A6Q14031 1691 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 E2F8A0AVK6 867 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 MTSS1O43312 755 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 CCNT2O60583 730 aaKnown RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 ODC1P11926 461 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 ANPEPP15144 967 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 NRG1Q02297 640 aaPredicted RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 TNK2Q07912 1038 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 SMAD1Q15797 465 aaKnown RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 ITPRIPL1Q6GPH6 555 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 TAF2Q6P1X5 1199 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 PDZD4Q76G19 769 aaPredicted RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 SERINC5Q86VE9 423 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 CPSF7Q8N684 471 aaKnown RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 URGCPQ8TCY9 931 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 DNAJC9Q8WXX5 260 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 EDEM1Q92611 657 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 MFSD3Q96ES6 412 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 WDCPQ9H6R7 721 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 IARS2Q9NSE4 1012 aaKnown RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 NVLO15381 856 aaKnown RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 CD1EP15812 388 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 MX2P20592 715 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 RGS2P41220 211 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 SCNN1GP51170 649 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 ARL13BQ3SXY8 428 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 LRRTM3Q86VH5 581 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 CNDP1Q96KN2 507 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 GAD1Q99259 594 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 IL12RB2Q99665 862 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 FERMT1Q9BQL6 677 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 COG4Q9H9E3 785 aa7.35□□□□□ -1.23
RGPD3-201ENST00000304514 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.35□□□□□ -1.23
RGPD3-201ENST00000304514 CASTOR2A6NHX0 329 aa7.34□□□□□ -1.23
RGPD3-201ENST00000304514 F9P00740 461 aa7.34□□□□□ -1.23
RGPD3-201ENST00000304514 SLC35E2BP0CK96 405 aa7.34□□□□□ -1.23
RGPD3-201ENST00000304514 CPA3P15088 417 aa7.34□□□□□ -1.23
RGPD3-201ENST00000304514 HTR7P34969 479 aa7.34□□□□□ -1.23
RGPD3-201ENST00000304514 POLD2P49005 469 aa7.34□□□□□ -1.23
RGPD3-201ENST00000304514 HK2P52789 917 aa7.34□□□□□ -1.23
RGPD3-201ENST00000304514 ZBTB16Q05516 673 aa7.34□□□□□ -1.23
RGPD3-201ENST00000304514 KDSRQ06136 332 aa7.34□□□□□ -1.23
RGPD3-201ENST00000304514 MSLNQ13421 630 aaPredicted RBP7.34□□□□□ -1.23
RGPD3-201ENST00000304514 TSTD2Q5T7W7 516 aa7.34□□□□□ -1.23
RGPD3-201ENST00000304514 TMCO4Q5TGY1 634 aa7.34□□□□□ -1.23
RGPD3-201ENST00000304514 PGM2L1Q6PCE3 622 aa7.34□□□□□ -1.23
RGPD3-201ENST00000304514 ZC3HC1Q86WB0 502 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms