RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ERVW-1Q9UQF0 538 aa25.05■■□□□ 1.6
HOXC9-201ENST00000303450 DFFAO00273 331 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 APOL1O14791 398 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 ATG13O75143 517 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 KLF8O95600 359 aaPredicted RBP25.04■■□□□ 1.6
HOXC9-201ENST00000303450 KRT10P13645 584 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 ZFXP17010 805 aaPredicted RBP25.04■■□□□ 1.6
HOXC9-201ENST00000303450 ST8SIA6P61647 398 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 TFDP2Q14188 446 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 ZNF234Q14588 700 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 PAFAH1B3Q15102 231 aaKnown RBP25.04■■□□□ 1.6
HOXC9-201ENST00000303450 PTPRNQ16849 979 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 HSF5Q4G112 596 aaPredicted RBP25.04■■□□□ 1.6
HOXC9-201ENST00000303450 FNDC3BQ53EP0 1204 aaKnown RBP25.04■■□□□ 1.6
HOXC9-201ENST00000303450 AFMIDQ63HM1 303 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 SDE2Q6IQ49 451 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 CCDC33Q8N5R6 958 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 IL17RCQ8NAC3 791 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 NETO2Q8NC67 525 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 RPL10LQ96L21 214 aaKnown RBP25.04■■□□□ 1.6
HOXC9-201ENST00000303450 ACOX2Q99424 681 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 KCND1Q9NSA2 647 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 DLGAP2Q9P1A6 1054 aa25.04■■□□□ 1.6
HOXC9-201ENST00000303450 hCG_1818297A0A087WSY0 165 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 SRPRAP08240 638 aaKnown RBP25.03■■□□□ 1.6
HOXC9-201ENST00000303450 PYGMP11217 842 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 CHRM1P11229 460 aaPredicted RBP25.03■■□□□ 1.6
HOXC9-201ENST00000303450 GLDCP23378 1020 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 NNMTP40261 264 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 PAPOLAP51003 745 aaKnown RBP25.03■■□□□ 1.6
HOXC9-201ENST00000303450 SERINC3Q13530 473 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 GAS6Q14393 721 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 PPP2R5EQ16537 467 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 TMEM31Q5JXX7 168 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 SLC9A4Q6AI14 798 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 RETSATQ6NUM9 610 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 SERPINA13PQ6UXR4 307 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 ARHGAP12Q8IWW6 846 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 SLC35F6Q8N357 371 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 TXNDC5Q8NBS9 432 aaKnown RBP25.03■■□□□ 1.6
HOXC9-201ENST00000303450 IER2Q9BTL4 223 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 CACNA2D2Q9NY47 1150 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 JRKLQ9Y4A0 524 aa25.03■■□□□ 1.6
HOXC9-201ENST00000303450 PRR33A8MZF0 331 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 CHURC1-FNTBB4DL54 471 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 KDELR3O43731 214 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 NTSR1P30989 418 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 DYNLT1P63172 113 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 ZNF211Q13398 564 aaPredicted RBP25.02■■□□□ 1.6
HOXC9-201ENST00000303450 PKN3Q6P5Z2 889 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 C17orf53Q8N3J3 647 aaPredicted RBP25.02■■□□□ 1.6
HOXC9-201ENST00000303450 TMEM105Q8N8V8 129 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 HEMGNQ9BXL5 484 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 MFSD11O43934 449 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 CST8O60676 142 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 ZMPSTE24O75844 475 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 IL12RB1P42701 662 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 WASP42768 502 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 STK19P49842 368 aaPredicted RBP25.02■■□□□ 1.6
HOXC9-201ENST00000303450 MTAPQ13126 283 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 EOGTQ5NDL2 527 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 TP53INP2Q8IXH6 220 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 SPEM1Q8N4L4 309 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 PLD5Q8N7P1 536 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 MRGPRX3Q96LB0 322 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 TLR10Q9BXR5 811 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 OSBPL8Q9BZF1 889 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 SLCO3A1Q9UIG8 710 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 STON1Q9Y6Q2 735 aa25.02■■□□□ 1.6
HOXC9-201ENST00000303450 ZSCAN5CA6NGD5 496 aaPredicted RBP25.01■■□□□ 1.59
HOXC9-201ENST00000303450 WASH3PC4AMC7 463 aa25.01■■□□□ 1.59
HOXC9-201ENST00000303450 PTPN7P35236 360 aa25.01■■□□□ 1.59
HOXC9-201ENST00000303450 ARF5P84085 180 aa25.01■■□□□ 1.59
HOXC9-201ENST00000303450 GBE1Q04446 702 aa25.01■■□□□ 1.59
HOXC9-201ENST00000303450 DCAF12L1Q5VU92 463 aa25.01■■□□□ 1.59
HOXC9-201ENST00000303450 AADACL2Q6P093 401 aa25.01■■□□□ 1.59
HOXC9-201ENST00000303450 LINGO4Q6UY18 593 aa25.01■■□□□ 1.59
HOXC9-201ENST00000303450 KDM1BQ8NB78 822 aa25.01■■□□□ 1.59
HOXC9-201ENST00000303450 MMP17Q9ULZ9 603 aa25.01■■□□□ 1.59
HOXC9-201ENST00000303450 EFR3BQ9Y2G0 817 aa25.01■■□□□ 1.59
HOXC9-201ENST00000303450 HEY1Q9Y5J3 304 aa25.01■■□□□ 1.59
HOXC9-201ENST00000303450 SGK1O00141 431 aa25■■□□□ 1.59
HOXC9-201ENST00000303450 KCNK3O14649 394 aa25■■□□□ 1.59
HOXC9-201ENST00000303450 ENC1O14682 589 aa25■■□□□ 1.59
HOXC9-201ENST00000303450 AVPR2P30518 371 aa25■■□□□ 1.59
HOXC9-201ENST00000303450 GEMIN4P57678 1058 aaKnown RBP25■■□□□ 1.59
HOXC9-201ENST00000303450 GNG11P61952 73 aa25■■□□□ 1.59
HOXC9-201ENST00000303450 SLC20A2Q08357 652 aa25■■□□□ 1.59
HOXC9-201ENST00000303450 SEL1L2Q5TEA6 688 aa25■■□□□ 1.59
HOXC9-201ENST00000303450 ATP11CQ8NB49 1132 aa25■■□□□ 1.59
HOXC9-201ENST00000303450 SPATA6Q9NWH7 488 aaPredicted RBP25■■□□□ 1.59
HOXC9-201ENST00000303450 SLC8A2Q9UPR5 921 aa25■■□□□ 1.59
HOXC9-201ENST00000303450 HS3ST2Q9Y278 367 aa25■■□□□ 1.59
HOXC9-201ENST00000303450 ADAM23O75077 832 aa24.99■■□□□ 1.59
HOXC9-201ENST00000303450 MAP3K6O95382 1288 aa24.99■■□□□ 1.59
HOXC9-201ENST00000303450 MT-CO1P00395 513 aa24.99■■□□□ 1.59
HOXC9-201ENST00000303450 VASPP50552 380 aaPredicted RBP24.99■■□□□ 1.59
HOXC9-201ENST00000303450 ADCY2Q08462 1091 aa24.99■■□□□ 1.59
HOXC9-201ENST00000303450 ENPP2Q13822 863 aa24.99■■□□□ 1.59
HOXC9-201ENST00000303450 ACCSLQ4AC99 568 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms