RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 CAPSQ13938 189 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 CERCAMQ5T4B2 595 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 ZNF618Q5T7W0 954 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 SCIMPQ6UWF3 145 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 DNAJC14Q6Y2X3 702 aaPredicted RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 ANKRD23Q86SG2 305 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 HERC6Q8IVU3 1022 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 CCDC103Q8IW40 242 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 ZCCHC7Q8N3Z6 543 aaKnown RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 LZICQ8WZA0 190 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 MFSD3Q96ES6 412 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 ARMC7Q9H6L4 198 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 NOL6Q9H6R4 1146 aaKnown RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 RUBCNLQ9H714 662 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 COQ10BQ9H8M1 238 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 PCDH18Q9HCL0 1135 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 TRNAU1APQ9NX07 287 aaKnown RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 PTTG2Q9NZH5 202 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 XPR1Q9UBH6 696 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 TFPTP0C1Z6 253 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 HOXA10P31260 410 aaPredicted RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 PPARGP37231 505 aaPredicted RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 NEK2P51955 445 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 IMPG1Q17R60 797 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 AGAP9Q5VTM2 703 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 OR52E8Q6IFG1 317 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 EMID1Q96A84 441 aaPredicted RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 AKT1S1Q96B36 256 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 PTCD3Q96EY7 689 aaKnown RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 OTUD5Q96G74 571 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 OR52B2Q96RD2 323 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 EGFL8Q99944 293 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 GATA5Q9BWX5 397 aaPredicted RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 DEFB129Q9H1M3 183 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 RMI1Q9H9A7 625 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 AFF4Q9UHB7 1163 aaKnown RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 RIPK3Q9Y572 518 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 A0A0A0MRY4 1105 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 CFAP99D6REC4 459 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 MAGEB3O15480 346 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 BUD23O43709 281 aaKnown RBP12.34□□□□□ -0.43
PDGFD-201ENST00000302251 HMBSP08397 361 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 SLC6A3Q01959 620 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 RP9Q8TA86 221 aaKnown RBP12.34□□□□□ -0.43
PDGFD-201ENST00000302251 LPGAT1Q92604 370 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 APBB2Q92870 758 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 SPATA13Q96N96 652 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 FICDQ9BVA6 458 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 WDCPQ9H6R7 721 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 SSU72Q9NP77 194 aaKnown RBP12.34□□□□□ -0.43
PDGFD-201ENST00000302251 PRMT7Q9NVM4 692 aaPredicted RBP12.34□□□□□ -0.43
PDGFD-201ENST00000302251 FAM8A1Q9UBU6 413 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 TIMM13Q9Y5L4 95 aaPredicted RBP12.34□□□□□ -0.43
PDGFD-201ENST00000302251 E5RI56 91 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 PEX10O60683 326 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 ADIGQ0VDE8 80 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 CCDC85BQ15834 202 aaPredicted RBP12.34□□□□□ -0.43
PDGFD-201ENST00000302251 LSM12Q3MHD2 195 aaKnown RBP12.34□□□□□ -0.43
PDGFD-201ENST00000302251 SLC9A4Q6AI14 798 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 BPIFB6Q8NFQ5 453 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 ULK4Q96C45 1275 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 C17orf80Q9BSJ5 609 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 KIF17Q9P2E2 1029 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 SH3GLB1Q9Y371 365 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 HES2Q9Y543 173 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 SLC15A5A6NIM6 579 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 SLCO1B7G3V0H7 640 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 VWA5AO00534 786 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 RAP1GDS1P52306 607 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 PGGT1BP53609 377 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 SPIDRQ14159 915 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 CRY2Q49AN0 593 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 PDSS2Q86YH6 399 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 FLAD1Q8NFF5 587 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 AGAP2Q99490 1192 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 RTKNQ9BST9 563 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 SP110Q9HB58 689 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 SCHIP1Q9P0W5 487 aaPredicted RBP12.34□□□□□ -0.43
PDGFD-201ENST00000302251 CRYL1Q9Y2S2 319 aa12.34□□□□□ -0.43
PDGFD-201ENST00000302251 DNAJA2O60884 412 aa12.33□□□□□ -0.43
PDGFD-201ENST00000302251 ASLP04424 464 aa12.33□□□□□ -0.43
PDGFD-201ENST00000302251 ITGAXP20702 1163 aa12.33□□□□□ -0.43
PDGFD-201ENST00000302251 BAG6P46379 1132 aa12.33□□□□□ -0.43
PDGFD-201ENST00000302251 SERPINB10P48595 397 aa12.33□□□□□ -0.43
PDGFD-201ENST00000302251 CA9Q16790 459 aa12.33□□□□□ -0.43
PDGFD-201ENST00000302251 PAN2Q504Q3 1202 aaKnown RBP12.33□□□□□ -0.43
PDGFD-201ENST00000302251 PAOXQ6QHF9 649 aa12.33□□□□□ -0.43
PDGFD-201ENST00000302251 PYROXD2Q8N2H3 581 aa12.33□□□□□ -0.43
PDGFD-201ENST00000302251 TTC39CQ8N584 583 aa12.33□□□□□ -0.43
PDGFD-201ENST00000302251 BLOC1S5Q8TDH9 187 aa12.33□□□□□ -0.43
PDGFD-201ENST00000302251 FIZ1Q96SL8 496 aa12.33□□□□□ -0.43
PDGFD-201ENST00000302251 CLK4Q9HAZ1 481 aaKnown RBP12.33□□□□□ -0.43
PDGFD-201ENST00000302251 SEPT3Q9UH03 358 aa12.33□□□□□ -0.43
PDGFD-201ENST00000302251 BLOC1S6Q9UL45 172 aa12.33□□□□□ -0.43
PDGFD-201ENST00000302251 OLIG2Q13516 323 aa12.33□□□□□ -0.44
PDGFD-201ENST00000302251 SAMD4BQ5PRF9 694 aaKnown RBP12.33□□□□□ -0.44
PDGFD-201ENST00000302251 SLC39A4Q6P5W5 647 aa12.33□□□□□ -0.44
PDGFD-201ENST00000302251 TAS2R42Q7RTR8 314 aa12.33□□□□□ -0.44
PDGFD-201ENST00000302251 NANOGNBQ7Z5D8 188 aa12.33□□□□□ -0.44
PDGFD-201ENST00000302251 XYLT1Q86Y38 959 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms