RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 GRIA1P42261 906 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 PPP2R2AP63151 447 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 SKOR1P84550 965 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 HNRNPDQ14103 355 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 TTC39BQ5VTQ0 682 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 TMC8Q8IU68 726 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 CCNJLQ8IV13 435 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 AGGF1Q8N302 714 aaeCLIP16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 CNTD1Q8N815 330 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 ARL14EPQ8N8R7 260 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 MAML1Q92585 1016 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 CFAP36Q96G28 342 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 SIGLEC10Q96LC7 697 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 SAMD11Q96NU1 681 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 CYP2S1Q96SQ9 504 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 CYTH2Q99418 400 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 NAT9Q9BTE0 207 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 LRRC40Q9H9A6 602 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 RBM22Q9NW64 420 aaKnown RBP eCLIP16.04■□□□□ 0.166e-8■■■■■ 33.4
HERPUD1-201ENST00000300302 PSD3Q9NYI0 1048 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 ZFP37Q9Y6Q3 630 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 NYNRINQ9P2P1 1898 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 MYO18AQ92614 2054 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 LAMA2P24043 3122 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 CACNG3O60359 315 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 FGF19O95750 216 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 PFKLP17858 780 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 IFNAR2P48551 515 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 NR1H3Q13133 447 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 RASA2Q15283 850 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 KCTD11Q693B1 232 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 PDE12Q6L8Q7 609 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 GAREM2Q75VX8 874 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 LINC00523Q86TU6 105 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 CFAP52Q8N1V2 620 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 STAMBPL1Q96FJ0 436 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 ZFRQ96KR1 1074 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 XPO6Q96QU8 1125 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 FCRL5Q96RD9 977 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 GORASP1Q9BQQ3 440 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 LRRC3Q9BY71 257 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 ATXN3LQ9H3M9 355 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 GLOD4Q9HC38 313 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 STOML2Q9UJZ1 356 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 TTLL3Q9Y4R7 772 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 OBSL1O75147 1896 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 TRAV19A0A0A6YYK7 116 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 TCRBV9S1A1TA0A576 114 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 TRDMT1O14717 391 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 CCL16O15467 120 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 ATP1A2P50993 1020 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 IL10RBQ08334 325 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 SERINC3Q13530 473 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 MARC1Q5VT66 337 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 NAPEPLDQ6IQ20 393 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 CASC4Q6P4E1 433 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 CHST9Q7L1S5 443 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 HS6ST3Q8IZP7 471 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 MYEOVQ96EZ4 313 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 SLC22A12Q96S37 553 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 CORO1BQ9BR76 489 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 MAGEH1Q9H213 219 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 CNOT10Q9H9A5 744 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 PSMC3IPQ9P2W1 217 aaPredicted RBP16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 LSM7Q9UK45 103 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 CPQQ9Y646 472 aa16.03■□□□□ 0.16
HERPUD1-201ENST00000300302 A0A1B0GVM2 712 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 TYW5A2RUC4 315 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 TCAF2A6NFQ2 919 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 GRM6O15303 877 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 CKMP06732 381 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 CA3P07451 260 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 MYL4P12829 197 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 GEMP55040 296 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 SESN2P58004 480 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 CYP4F8P98187 520 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 SPARCL1Q14515 664 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 OTOP3Q7RTS5 596 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 MAB21L3Q8N8X9 362 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 DNAAF3Q8N9W5 541 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 ARHGEF2Q92974 986 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 PABPC5Q96DU9 382 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 PRICKLE1Q96MT3 831 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 TGS1Q96RS0 853 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 MLPHQ9BV36 600 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 CAPS2Q9BXY5 557 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 MAN1C1Q9NR34 630 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 CTNNAL1Q9UBT7 734 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 TBK1Q9UHD2 729 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 DPP7Q9UHL4 492 aa16.02■□□□□ 0.16
HERPUD1-201ENST00000300302 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 A0A1W2PRU2 124 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 J3KR12 359 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 HLA-DQB2P05538 268 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 RPS24P62847 133 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 SLC7A9P82251 487 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 ZNF177Q13360 481 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 SETD3Q86TU7 594 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 KLHDC8BQ8IXV7 354 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 GSDMBQ8TAX9 411 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms