RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 MFSD3Q96ES6 412 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 WNK4Q96J92 1243 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 SLC29A1Q99808 456 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 NAT9Q9BTE0 207 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 DRC3Q9H069 523 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 LRRC40Q9H9A6 602 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 RMI1Q9H9A7 625 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 COQ6Q9Y2Z9 468 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 SNX9Q9Y5X1 595 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 STYXL1Q9Y6J8 313 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 A0A1W2PPW3 197 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 SH3PXD2BA1X283 911 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.61□□□□□ -0.55
TRUB1-201ENST00000298746 BTBD19C9JJ37 291 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 NPM3O75607 178 aaKnown RBP11.61□□□□□ -0.55
TRUB1-201ENST00000298746 BCAS2O75934 225 aaPredicted RBP11.61□□□□□ -0.55
TRUB1-201ENST00000298746 C1QAP02745 245 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 PLK1P53350 603 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 STX1BP61266 288 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 STXBP2Q15833 593 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 TBCELQ5QJ74 424 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 KDELC2Q7Z4H8 507 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 LPAR1Q92633 364 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 EXT2Q93063 718 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 COX4I2Q96KJ9 171 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 RBM38Q9H0Z9 239 aaKnown RBP11.61□□□□□ -0.55
TRUB1-201ENST00000298746 CXorf21Q9HAI6 301 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 ZDHHC2Q9UIJ5 367 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 VANGL2Q9ULK5 521 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 SBF2Q86WG5 1849 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 ATP6AP2A0A1C7CYW4 349 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 E7ENX8 843 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 GCATO75600 419 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 ATP6AP2O75787 350 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 GSRP00390 522 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 ENPEPQ07075 957 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 LAMTOR4Q0VGL1 99 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 BNIP3Q12983 259 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 TAZQ16635 292 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 FAM160B1Q5W0V3 765 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 NCCRP1Q6ZVX7 275 aaPredicted RBP11.6□□□□□ -0.55
TRUB1-201ENST00000298746 ZNF534Q76KX8 674 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 OFCC1Q8IZS5 231 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 TRAPPC12Q8WVT3 735 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 SLC39A3Q9BRY0 314 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 MRPL40Q9NQ50 206 aaKnown RBP11.6□□□□□ -0.55
TRUB1-201ENST00000298746 FAIMQ9NVQ4 179 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 FZD1Q9UP38 647 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 CLOCKO15516 846 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 IL4RP24394 825 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 EMP3P54852 163 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 SNX16P57768 344 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 TRIM25Q14258 630 aaKnown RBP11.6□□□□□ -0.55
TRUB1-201ENST00000298746 FASTKQ14296 549 aaKnown RBP11.6□□□□□ -0.55
TRUB1-201ENST00000298746 TRIM16LQ309B1 348 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 DHFR2Q86XF0 187 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 CBR4Q8N4T8 237 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 VPS39Q96JC1 886 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 ACO2Q99798 780 aaKnown RBP11.6□□□□□ -0.55
TRUB1-201ENST00000298746 ZNF670Q9BS34 389 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 XYLT2Q9H1B5 865 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 EGFL7Q9UHF1 273 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 ZNF232Q9UNY5 417 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 SRP72O76094 671 aaKnown RBP11.6□□□□□ -0.55
TRUB1-201ENST00000298746 IL10P22301 178 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 JADE1Q6IE81 842 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 TRNP1Q6NT89 227 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 PMF1Q6P1K2 205 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 MPZL3Q6UWV2 235 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 CHST15Q7LFX5 561 aaPredicted RBP11.6□□□□□ -0.55
TRUB1-201ENST00000298746 KCNMB4Q86W47 210 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 SULF1Q8IWU6 871 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 CPNE9Q8IYJ1 553 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 BBS5Q8N3I7 341 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 RIN3Q8TB24 985 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 ISOC1Q96CN7 298 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 P2RY11Q96G91 374 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 TBCBQ99426 244 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 MTG1Q9BT17 334 aaPredicted RBP11.6□□□□□ -0.55
TRUB1-201ENST00000298746 ING2Q9H160 280 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 MRPL46Q9H2W6 279 aaKnown RBP11.6□□□□□ -0.55
TRUB1-201ENST00000298746 RNF19AQ9NV58 838 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 GID8Q9NWU2 228 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 DTLQ9NZJ0 730 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 BARX2Q9UMQ3 279 aaPredicted RBP11.6□□□□□ -0.55
TRUB1-201ENST00000298746 SLC8A2Q9UPR5 921 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 RNF11Q9Y3C5 154 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 COPG1Q9Y678 874 aaKnown RBP11.6□□□□□ -0.55
TRUB1-201ENST00000298746 SQORQ9Y6N5 450 aa11.6□□□□□ -0.55
TRUB1-201ENST00000298746 LACTBL1A8MY62 500 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 MATN2O00339 956 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 VWA5AO00534 786 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 MRASO14807 208 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 KDM1AO60341 852 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 PLA2G6O60733 806 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 DDHD2O94830 711 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 HOXC6P09630 235 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 ARL2P36404 184 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 NR1D2Q14995 579 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 LDLRAP1Q5SW96 308 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms