RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 VBP1P61758 197 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 HSF2Q03933 536 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 MFSD7Q6UXD7 560 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 RAD9BQ6WBX8 426 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 BCL10O95999 233 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 EPORP19235 508 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 CHN2P52757 468 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 HK2P52789 917 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 HSDL2Q6YN16 418 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 WDR49Q8IV35 697 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 DNAAF1Q8NEP3 725 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 SEPHS2Q99611 448 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 CGRRF1Q99675 332 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 BDH2Q9BUT1 245 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 PCP4L1A6NKN8 68 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 CD3EAPO15446 510 aaKnown RBP12.24□□□□□ -0.45
PCF11-201ENST00000298281 ATMINO43313 823 aaPredicted RBP12.24□□□□□ -0.45
PCF11-201ENST00000298281 SERPINF2P08697 491 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 POMZP3Q6PJE2 187 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 ZNF621Q6ZSS3 439 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 DENND5BQ6ZUT9 1274 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 GALNT7Q86SF2 657 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 REPS1Q96D71 796 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 TBC1D10AQ9BXI6 508 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 TMEM120AQ9BXJ8 343 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 NOX1Q9Y5S8 564 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 CCDC162PA2VCL2 907 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 G3V2T6 193 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 SCN2BO60939 215 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 LTFP02788 710 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 DNASE1L1P49184 302 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 RAB27AP51159 221 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 PSME3P61289 254 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 PPP2R2BQ00005 443 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 TRMT5Q32P41 509 aaKnown RBP12.24□□□□□ -0.45
PCF11-201ENST00000298281 ZYG11AQ6WRX3 759 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 STRA8Q7Z7C7 330 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 TRAPPC5Q8IUR0 188 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 SLC4A11Q8NBS3 891 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 TMEM68Q96MH6 324 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 VPS45Q9NRW7 570 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 ATPIF1Q9UII2 106 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 A0A0G2JLW4 131 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 FARP2O94887 1054 aaPredicted RBP12.23□□□□□ -0.45
PCF11-201ENST00000298281 TCF4P15884 667 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 CTXN3Q4LDR2 81 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 OTUD3Q5T2D3 398 aaPredicted RBP12.23□□□□□ -0.45
PCF11-201ENST00000298281 LLGL2Q6P1M3 1020 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 SVOPQ8N4V2 548 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 THAP2Q9H0W7 228 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 CCDC163A0A0D9SF12 145 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 MOXD2PA6NHM9 499 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 FCHO1O14526 889 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 AVILO75366 819 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 CYP11B1P15538 503 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 PON1P27169 355 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 KCTD8Q6ZWB6 473 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 SAPCD2Q86UD0 394 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 ERO1BQ86YB8 467 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 LZTR1Q8N653 840 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 OR2W6PQ8NHA6 318 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 ACTRT1Q8TDG2 376 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 APOL4Q9BPW4 351 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 SYT15Q9BQS2 421 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 GPAMQ9HCL2 828 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 SPG21Q9NZD8 308 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.23□□□□□ -0.45
PCF11-201ENST00000298281 ZMYM5Q9UJ78 669 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 PSME2Q9UL46 239 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 A0A096LPK6 155 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 UGT1A5P35504 534 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 PIK3CGP48736 1102 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 NR2C2P49116 596 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 NFIAQ12857 509 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 CCDC153Q494R4 210 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 FAM98BQ52LJ0 330 aaKnown RBP12.23□□□□□ -0.45
PCF11-201ENST00000298281 DGLUCYQ7Z3D6 616 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 TMEM132CQ8N3T6 1108 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 FBXO36Q8NEA4 188 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 FAM81AQ8TBF8 368 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 ATG4CQ96DT6 458 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 ASB2Q96Q27 587 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 NECTIN3Q9NQS3 549 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 MOCS1Q9NZB8 636 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 MSRAQ9UJ68 235 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 DNMT3LQ9UJW3 386 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 GLI2P10070 1586 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 TGFB3P10600 412 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 MGAT5Q09328 741 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 VPS72Q15906 364 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 WDR93Q6P2C0 686 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 TMEM79Q9BSE2 394 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 UBP1Q9NZI7 540 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 GGA2Q9UJY4 613 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 AP4E1Q9UPM8 1137 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 MAPRE3Q9UPY8 281 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 ARL5AQ9Y689 179 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 TBC1D3BA6NDS4 549 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 CCDC154A6NI56 674 aa12.23□□□□□ -0.45
PCF11-201ENST00000298281 BAIAP3O94812 1187 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms