RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 DDIT4Q9NX09 232 aa24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 FIS1Q9Y3D6 152 aa24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 SF3B1O75533 1304 aaKnown RBP eCLIP24.87■■□□□ 1.572e-9■■■■■ 224
SPTSSA-201ENST00000298130 PTPN1P18031 435 aaKnown RBP24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 RPL34P49207 117 aaKnown RBP24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 NAGLUP54802 743 aa24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 INSCQ1MX18 579 aa24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 CATSPER2Q96P56 530 aa24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 KLHL4Q9C0H6 718 aa24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 PCDHGB4Q9UN71 923 aa24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 PCDHGB5Q9Y5G0 923 aa24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 TMEM233B4DJY2 109 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 TRIM13O60858 407 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 TOMM70O94826 608 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 PAFAH1B3Q15102 231 aaKnown RBP24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 CCDC153Q494R4 210 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 GPRC5AQ8NFJ5 357 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 KCTD4Q8WVF5 259 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 NR1H4Q96RI1 486 aaPredicted RBP24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 NAT9Q9BTE0 207 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 STAP1Q9ULZ2 295 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 ARHGAP26Q9UNA1 814 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 DERAQ9Y315 318 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 TCN1P20061 433 aaPredicted RBP24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 GRIA2P42262 883 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 GRIA4P48058 902 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 PPIL2Q13356 520 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 GSTA3Q16772 222 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 FBXL19Q6PCT2 694 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 ARHGAP36Q6ZRI8 547 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 TMEM135Q86UB9 458 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 TRIM4Q9C037 500 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 ADARB2Q9NS39 739 aaKnown RBP24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 CDY2AQ9Y6F7 541 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 CDY1Q9Y6F8 540 aa24.86■■□□□ 1.57
SPTSSA-201ENST00000298130 H3BNX3 289 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 PIGNO95427 931 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 DARSP14868 501 aaKnown RBP24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 PDCD2Q16342 344 aaPredicted RBP24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 LSM12Q3MHD2 195 aaKnown RBP24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 ARL13AQ5H913 290 aaPredicted RBP24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 TNIP3Q96KP6 325 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 STN1Q9H668 368 aaKnown RBP24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 ZNF408Q9H9D4 720 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 PDP2Q9P2J9 529 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 ZDHHC2Q9UIJ5 367 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 INPP5FQ9Y2H2 1132 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 PLXNA1Q9UIW2 1896 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 A0A1B0GVG6 124 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 SRGAP2BP0DMP2 458 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 ALOX15P16050 662 aaPredicted RBP24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 CTBP1Q13363 440 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 MMEL1Q495T6 779 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 ZNF280DQ6N043 979 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 AAGABQ6PD74 315 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 DENND6AQ8IWF6 608 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 FAM156AQ8NDB6 213 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 ACE2Q9BYF1 805 aaPredicted RBP24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 WDR6Q9NNW5 1121 aaKnown RBP24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 VTA1Q9NP79 307 aa24.85■■□□□ 1.57
SPTSSA-201ENST00000298130 MT-CYBP00156 380 aaPredicted RBP24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 ATP5BP06576 529 aaKnown RBP24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 SMIM10L2AP0DMW4 78 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 SMIM10L2BP0DMW5 78 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 VCLP18206 1134 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 PIK3R1P27986 724 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 MRPS22P82650 360 aaKnown RBP24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 MED21Q13503 144 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 CWF19L1Q69YN2 538 aaKnown RBP24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 SLC41A1Q8IVJ1 513 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 CDRT15Q96T59 188 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 FTHL17Q9BXU8 183 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 RCOR3Q9P2K3 495 aaPredicted RBP24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 COL1A2P08123 1366 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 SHROOM3Q8TF72 1996 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 MYBPHLA2RUH7 354 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 ENO3P13929 434 aaPredicted RBP24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 USP10Q14694 798 aaKnown RBP24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 DGKDQ16760 1214 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 FASTKD5Q7L8L6 764 aaKnown RBP24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 GALNT15Q8N3T1 639 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 NT5C3BQ969T7 300 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 ZNF560Q96MR9 790 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 HNRNPABQ99729 332 aaKnown RBP24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 ATXN3LQ9H3M9 355 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 FAM124BQ9H5Z6 455 aaPredicted RBP24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 CRTAC1Q9NQ79 661 aa24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 RUVBL2Q9Y230 463 aaKnown RBP24.84■■□□□ 1.57
SPTSSA-201ENST00000298130 SBK3P0C264 359 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 CYP2B6P20813 491 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 GSTT1P30711 240 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 MPP1Q00013 466 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 POU6F1Q14863 301 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 CCNYL1Q8N7R7 359 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 DNAJB4Q9UDY4 337 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 TREHO43280 583 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 PGM3O95394 542 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 CD4P01730 458 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 MTTPP55157 894 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 CCNA1P78396 465 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms