RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 SLC26A7Q8TE54 656 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 FCRL2Q96LA5 508 aaPredicted RBP13.8□□□□□ -0.2
TTC39B-201ENST00000297615 QKIQ96PU8 341 aaKnown RBP eCLIP13.8□□□□□ -0.27e-7■■■□□ 17.1
TTC39B-201ENST00000297615 FICDQ9BVA6 458 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 SSU72Q9NP77 194 aaKnown RBP13.8□□□□□ -0.2
TTC39B-201ENST00000297615 OSER1Q9NX31 292 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 TK2O00142 265 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 DCXO43602 365 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 PAGE1O75459 146 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 CNTN5O94779 1100 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 ITGA2BP08514 1039 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 SLC5A3P53794 718 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 CCL23P55773 120 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 PDK1Q15118 436 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 PSMD5Q16401 504 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 MGAT5BQ3V5L5 792 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 DEFB128Q7Z7B8 93 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 ZNF467Q7Z7K2 595 aaPredicted RBP13.8□□□□□ -0.2
TTC39B-201ENST00000297615 CHSY1Q86X52 802 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 SCUBE1Q8IWY4 988 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 CNTD1Q8N815 330 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 WDR55Q9H6Y2 383 aaPredicted RBP13.8□□□□□ -0.2
TTC39B-201ENST00000297615 SUDS3Q9H7L9 328 aaPredicted RBP13.8□□□□□ -0.2
TTC39B-201ENST00000297615 GDAP2Q9NXN4 497 aa13.8□□□□□ -0.2
TTC39B-201ENST00000297615 APOBEC2Q9Y235 224 aaKnown RBP13.8□□□□□ -0.2
TTC39B-201ENST00000297615 PROCP04070 461 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 KCNE1P15382 129 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 PRKCHP24723 683 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 PNPLA4P41247 253 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 LPIN1Q14693 890 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 ESRP1Q6NXG1 681 aaKnown RBP13.79□□□□□ -0.2
TTC39B-201ENST00000297615 LRRC74BQ6ZQY2 392 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 PPFIBP2Q8ND30 876 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 ST13P5Q8NFI4 369 aaPredicted RBP13.79□□□□□ -0.2
TTC39B-201ENST00000297615 MTBPQ96DY7 904 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 CHST12Q9NRB3 414 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 BFARQ9NZS9 450 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 KCTD3Q9Y597 815 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 CFLARO15519 480 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 ARRB2P32121 409 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 OCRLQ01968 901 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 UPP1Q16831 310 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 WASHC2DQ5SRD0 308 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 MFSD14CQ5VZR4 134 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 METTL23Q86XA0 190 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 PAF1Q8N7H5 531 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 TEKT4Q8WW24 435 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 SCLYQ96I15 445 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 MLPHQ9BV36 600 aaPredicted RBP13.79□□□□□ -0.2
TTC39B-201ENST00000297615 NT5MQ9NPB1 228 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 RBM22Q9NW64 420 aaKnown RBP eCLIP13.79□□□□□ -0.2
TTC39B-201ENST00000297615 SPEGQ15772 3267 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 FAM159BA6NKW6 160 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 J3KR12 359 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 SMAPO00193 183 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 HAS3O00219 553 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 TXNDC9O14530 226 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 MAP3K13O43283 966 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 CHRNGP07510 517 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 IRF1P10914 325 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 SERPINB6P35237 376 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 SERPINB5P36952 375 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 YWHAHQ04917 246 aaPredicted RBP13.79□□□□□ -0.2
TTC39B-201ENST00000297615 CUL3Q13618 768 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 ITGA7Q13683 1181 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 FAM171A1Q5VUB5 890 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 PTAR1Q7Z6K3 402 aaPredicted RBP13.79□□□□□ -0.2
TTC39B-201ENST00000297615 SLC41A1Q8IVJ1 513 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 ULK2Q8IYT8 1036 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 MCUQ8NE86 351 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 OR6P1Q8NGX9 317 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 PDCD6IPQ8WUM4 868 aaKnown RBP13.79□□□□□ -0.2
TTC39B-201ENST00000297615 SPON2Q9BUD6 331 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 FETUBQ9UGM5 382 aa13.79□□□□□ -0.2
TTC39B-201ENST00000297615 DPYSL4O14531 572 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 TADA2AO75478 443 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 GCATO75600 419 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 HSPA4LO95757 839 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 SPATA31D3P0C874 917 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 CPB1P15086 417 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 ZNF789Q5FWF6 425 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 C6orf163Q5TEZ5 329 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 NAIF1Q69YI7 327 aaPredicted RBP13.78□□□□□ -0.2
TTC39B-201ENST00000297615 FSTL4Q6MZW2 842 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 SPATA31D4Q6ZUB0 917 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 NT5DC4Q86YG4 428 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 KLHDC9Q8NEP7 349 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 ZSCAN18Q8TBC5 510 aaPredicted RBP13.78□□□□□ -0.2
TTC39B-201ENST00000297615 CENPIQ92674 756 aaPredicted RBP13.78□□□□□ -0.2
TTC39B-201ENST00000297615 ERLEC1Q96DZ1 483 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 FAM193BQ96PV7 902 aaPredicted RBP13.78□□□□□ -0.2
TTC39B-201ENST00000297615 KATNAL1Q9BW62 490 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 SLC39A8Q9C0K1 460 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 SLC7A8Q9UHI5 535 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 EMCNQ9ULC0 261 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 USP3Q9Y6I4 520 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 PLXNA1Q9UIW2 1896 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 RGPD3A6NKT7 1758 aaPredicted RBP13.78□□□□□ -0.2
TTC39B-201ENST00000297615 RGPD4Q7Z3J3 1758 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms