RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 GSTA2P09210 222 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 CCT5P48643 541 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 PPP2R2AP63151 447 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 LGI2Q8N0V4 545 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 MRPL43Q8N983 215 aaKnown RBP15.88■□□□□ 0.13
LSM6-201ENST00000296581 KREMEN2Q8NCW0 462 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 FBF1Q8TES7 1133 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 ENTPD7Q9NQZ7 604 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 SLC24A2Q9UI40 661 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 ARHGAP42A6NI28 874 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 RASA4BC9J798 803 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 C5orf67F2Z3F1 127 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 EBAG9O00559 213 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 RASA4O43374 803 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 C8AP07357 584 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 DNAJB1P25685 340 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 ATP5DP30049 168 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 CORO1AP31146 461 aaKnown RBP15.87■□□□□ 0.13
LSM6-201ENST00000296581 HPDP32754 393 aaPredicted RBP15.87■□□□□ 0.13
LSM6-201ENST00000296581 UBE3AQ05086 875 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 CRYMQ14894 314 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 KLHL38Q2WGJ6 581 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 TMC8Q8IU68 726 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 DENND1CQ8IV53 801 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 POF1BQ8WVV4 589 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 HMCESQ96FZ2 354 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 ZNF419Q96HQ0 510 aaPredicted RBP15.87■□□□□ 0.13
LSM6-201ENST00000296581 ZFRQ96KR1 1074 aaKnown RBP15.87■□□□□ 0.13
LSM6-201ENST00000296581 EBNA1BP2Q99848 306 aaKnown RBP15.87■□□□□ 0.13
LSM6-201ENST00000296581 MLPHQ9BV36 600 aaPredicted RBP15.87■□□□□ 0.13
LSM6-201ENST00000296581 PLAC1Q9HBJ0 212 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 GKN1Q9NS71 199 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 ZC3H7BQ9UGR2 993 aaKnown RBP15.87■□□□□ 0.13
LSM6-201ENST00000296581 HIDE1A8MVS5 230 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 CHUKO15111 745 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 PEX11BO96011 259 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 LRG1P02750 347 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 IFNAR2P48551 515 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 ATP1A2P50993 1020 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 YBEYP58557 167 aaPredicted RBP15.87■□□□□ 0.13
LSM6-201ENST00000296581 PARP15Q460N3 678 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 ITFG2Q969R8 447 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 LBHD1Q9BQE6 289 aaPredicted RBP15.87■□□□□ 0.13
LSM6-201ENST00000296581 DHRS4Q9BTZ2 278 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 STOML2Q9UJZ1 356 aa15.87■□□□□ 0.13
LSM6-201ENST00000296581 SHOX2O60902 331 aaPredicted RBP15.86■□□□□ 0.13
LSM6-201ENST00000296581 GLUD1P00367 558 aa15.86■□□□□ 0.13
LSM6-201ENST00000296581 ANO4Q32M45 955 aa15.86■□□□□ 0.13
LSM6-201ENST00000296581 PLPP4Q5VZY2 271 aa15.86■□□□□ 0.13
LSM6-201ENST00000296581 CIR1Q86X95 450 aaPredicted RBP15.86■□□□□ 0.13
LSM6-201ENST00000296581 MPP5Q8N3R9 675 aa15.86■□□□□ 0.13
LSM6-201ENST00000296581 USP33Q8TEY7 942 aa15.86■□□□□ 0.13
LSM6-201ENST00000296581 XPO6Q96QU8 1125 aaKnown RBP15.86■□□□□ 0.13
LSM6-201ENST00000296581 FCRL5Q96RD9 977 aa15.86■□□□□ 0.13
LSM6-201ENST00000296581 C17orf80Q9BSJ5 609 aa15.86■□□□□ 0.13
LSM6-201ENST00000296581 GLOD4Q9HC38 313 aa15.86■□□□□ 0.13
LSM6-201ENST00000296581 CD248Q9HCU0 757 aa15.86■□□□□ 0.13
LSM6-201ENST00000296581 TLR9Q9NR96 1032 aa15.86■□□□□ 0.13
LSM6-201ENST00000296581 AGO1Q9UL18 857 aaKnown RBP15.86■□□□□ 0.13
LSM6-201ENST00000296581 TCRBV9S1A1TA0A576 114 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 A6NNZ2 444 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 RAMP2O60895 175 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 LATS1O95835 1130 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 MBL2P11226 248 aaPredicted RBP15.85■□□□□ 0.13
LSM6-201ENST00000296581 GEMIN4P57678 1058 aaKnown RBP15.85■□□□□ 0.13
LSM6-201ENST00000296581 PRPSAP1Q14558 356 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 TUBB8Q3ZCM7 444 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 RABGAP1LQ5R372 815 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 RFWD3Q6PCD5 774 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 GAREM2Q75VX8 874 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 EXOC3L1Q86VI1 746 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 CYP4X1Q8N118 509 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 ARHGEF2Q92974 986 aaKnown RBP15.85■□□□□ 0.13
LSM6-201ENST00000296581 WBP2Q969T9 261 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 SLC22A12Q96S37 553 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 CYTH2Q99418 400 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 CAPS2Q9BXY5 557 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 CASS4Q9NQ75 786 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 TTLL3Q9Y4R7 772 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 SDR42E2A6NKP2 422 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 POC1B-GALNT4F8VUJ3 575 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 H3BNC9 293 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 PSMD3O43242 534 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 C1RP00736 705 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 C1QAP02745 245 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 GABRR2P28476 465 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 OR1E1P30953 314 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 STX2P32856 288 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 CDH4P55283 916 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 TNK2Q07912 1038 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 HNRNPDQ14103 355 aaKnown RBP15.85■□□□□ 0.13
LSM6-201ENST00000296581 SPARCL1Q14515 664 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 POLD3Q15054 466 aaPredicted RBP15.85■□□□□ 0.13
LSM6-201ENST00000296581 ADGRF1Q5T601 910 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 UNC5AQ6ZN44 842 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 CFAP36Q96G28 342 aa15.85■□□□□ 0.13
LSM6-201ENST00000296581 OXNAD1Q96HP4 312 aaPredicted RBP15.85■□□□□ 0.13
LSM6-201ENST00000296581 PRICKLE1Q96MT3 831 aaPredicted RBP15.85■□□□□ 0.13
LSM6-201ENST00000296581 CNOT10Q9H9A5 744 aaKnown RBP15.85■□□□□ 0.13
LSM6-201ENST00000296581 RBM22Q9NW64 420 aaKnown RBP eCLIP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms