RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 RBM22Q9NW64 420 aaKnown RBP eCLIP23.33■■□□□ 1.32
PTX3-201ENST00000295927 ZC3H7BQ9UGR2 993 aaKnown RBP23.33■■□□□ 1.32
PTX3-201ENST00000295927 CPQQ9Y646 472 aa23.33■■□□□ 1.32
PTX3-201ENST00000295927 ERI2A8K979 691 aaKnown RBP23.32■■□□□ 1.32
PTX3-201ENST00000295927 POC1B-GALNT4F8VUJ3 575 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 CDH16O75309 829 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 CPP00450 1065 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 MYL4P12829 197 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 CDC25CP30307 473 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 SGSHP51688 502 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 CDH4P55283 916 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 OLIG2Q13516 323 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 PRPSAP1Q14558 356 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 KDM7AQ6ZMT4 941 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 ZNF354CQ86Y25 554 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 EBNA1BP2Q99848 306 aaKnown RBP23.32■■□□□ 1.32
PTX3-201ENST00000295927 RETREG1Q9H6L5 497 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 ACSS3Q9H6R3 686 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 SP110Q9HB58 689 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 GLOD4Q9HC38 313 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 MAN1C1Q9NR34 630 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 ASAH2Q9NR71 780 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 PIH1D1Q9NWS0 290 aaKnown RBP23.32■■□□□ 1.32
PTX3-201ENST00000295927 LGALS13Q9UHV8 139 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 STOML2Q9UJZ1 356 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 MAD1L1Q9Y6D9 718 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 MYO7AQ13402 2215 aa23.32■■□□□ 1.32
PTX3-201ENST00000295927 A0A1W2PRU2 124 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 H3BNC9 293 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 SPAG6O75602 509 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 HLA-DQB2P05538 268 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 GJA1P17302 382 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 MMP13P45452 471 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 ATP1A2P50993 1020 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 SERINC3Q13530 473 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 EMC10Q5UCC4 262 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.31■■□□□ 1.32
PTX3-201ENST00000295927 OXNAD1Q96HP4 312 aaPredicted RBP23.31■■□□□ 1.32
PTX3-201ENST00000295927 GCNAQ96QF7 691 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 XPO6Q96QU8 1125 aaKnown RBP23.31■■□□□ 1.32
PTX3-201ENST00000295927 DDX50Q9BQ39 737 aaKnown RBP23.31■■□□□ 1.32
PTX3-201ENST00000295927 HCFC1R1Q9NWW0 138 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 EURLQ9NYK6 297 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 TTLL3Q9Y4R7 772 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 GREM1O60565 184 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 TSPAN3O60637 253 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 RFPL2O75678 378 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 LATS1O95835 1130 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 ACVRL1P37023 503 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 MAGEA10P43363 369 aaPredicted RBP23.31■■□□□ 1.32
PTX3-201ENST00000295927 SESN2P58004 480 aaPredicted RBP23.31■■□□□ 1.32
PTX3-201ENST00000295927 HNRNPDQ14103 355 aaKnown RBP23.31■■□□□ 1.32
PTX3-201ENST00000295927 TERF2Q15554 542 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 FCRL5Q96RD9 977 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 TGS1Q96RS0 853 aaKnown RBP23.31■■□□□ 1.32
PTX3-201ENST00000295927 PLAC1Q9HBJ0 212 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 UBP1Q9NZI7 540 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 TBK1Q9UHD2 729 aa23.31■■□□□ 1.32
PTX3-201ENST00000295927 TCRBV9S1A1TA0A576 114 aa23.3■■□□□ 1.32
PTX3-201ENST00000295927 SCAMP3O14828 347 aaKnown RBP23.3■■□□□ 1.32
PTX3-201ENST00000295927 CLASP2O75122 1294 aaKnown RBP23.3■■□□□ 1.32
PTX3-201ENST00000295927 USP12O75317 370 aa23.3■■□□□ 1.32
PTX3-201ENST00000295927 NEBLO76041 1014 aa23.3■■□□□ 1.32
PTX3-201ENST00000295927 CKMP06732 381 aa23.3■■□□□ 1.32
PTX3-201ENST00000295927 EFTUD2Q15029 972 aaKnown RBP eCLIP23.3■■□□□ 1.32
PTX3-201ENST00000295927 RTL10Q7L3V2 364 aa23.3■■□□□ 1.32
PTX3-201ENST00000295927 TDRPQ86YL5 185 aa23.3■■□□□ 1.32
PTX3-201ENST00000295927 KLHDC8BQ8IXV7 354 aa23.3■■□□□ 1.32
PTX3-201ENST00000295927 CYP4X1Q8N118 509 aa23.3■■□□□ 1.32
PTX3-201ENST00000295927 RIBC1Q8N443 379 aaPredicted RBP23.3■■□□□ 1.32
PTX3-201ENST00000295927 OR52K1Q8NGK4 314 aa23.3■■□□□ 1.32
PTX3-201ENST00000295927 SDR42E2A6NKP2 422 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 CLDN11O75508 207 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 EPCAMP16422 314 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 MGAT1P26572 445 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 RENBPP51606 427 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 PPP2R2AP63151 447 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 SLC7A9P82251 487 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 SKOR1P84550 965 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 IL10RBQ08334 325 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 KLHL38Q2WGJ6 581 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 STXBP5Q5T5C0 1151 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 SPATA22Q8NHS9 363 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 ARHGEF2Q92974 986 aaKnown RBP23.29■■□□□ 1.32
PTX3-201ENST00000295927 PABPC5Q96DU9 382 aaKnown RBP23.29■■□□□ 1.32
PTX3-201ENST00000295927 LRRC40Q9H9A6 602 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 PPCSQ9HAB8 311 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 FETUBQ9UGM5 382 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 SLC24A2Q9UI40 661 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 CHD7Q9P2D1 2997 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 PSMD3O43242 534 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 CCR2P41597 374 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 IFNAR2P48551 515 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 GEMIN4P57678 1058 aaKnown RBP23.29■■□□□ 1.32
PTX3-201ENST00000295927 CRADDP78560 199 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 SLC10A7Q0GE19 358 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 GPM6BQ13491 265 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 UNC5AQ6ZN44 842 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 Q6ZNB5 142 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 ARFGAP2Q8N6H7 521 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms