RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 ADAMTS1Q9UHI8 967 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 SCML1Q9UN30 329 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 TLR6Q9Y2C9 796 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 CA5BQ9Y2D0 317 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 RAI2Q9Y5P3 530 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 GCN1Q92616 2671 aaKnown RBP9.59□□□□□ -0.87
CNOT9-202ENST00000295701 ITIH6Q6UXX5 1313 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 TRPM6Q9BX84 2022 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 MGAQ8IWI9 3026 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 TBC1D3DA0A087WVF3 549 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 TBC1D3IA0A087WXS9 549 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 TBC1D3EA0A087X179 549 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 TBC1D3KA0A087X1G2 549 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 EDDM13A0A1B0GTR0 161 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 TARSL2A2RTX5 802 aaKnown RBP9.58□□□□□ -0.88
CNOT9-202ENST00000295701 TBC1D3FA6NER0 549 aaPredicted RBP9.58□□□□□ -0.88
CNOT9-202ENST00000295701 LRRC72A6NJI9 287 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 TBC1D3LB9A6J9 549 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 DFNA5O60443 496 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 RTN2O75298 545 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 RFPL3O75679 317 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 FBXO21O94952 628 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 SRPRAP08240 638 aaKnown RBP9.58□□□□□ -0.88
CNOT9-202ENST00000295701 TBC1D3HP0C7X1 549 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 PDGFRAP16234 1089 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 GOT1P17174 413 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 TACR2P21452 398 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 MAT2AP31153 395 aaKnown RBP9.58□□□□□ -0.88
CNOT9-202ENST00000295701 EIF2S3P41091 472 aaKnown RBP9.58□□□□□ -0.88
CNOT9-202ENST00000295701 GPD2P43304 727 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 RPL34P49207 117 aaKnown RBP9.58□□□□□ -0.88
CNOT9-202ENST00000295701 ACADVLP49748 655 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 CCR5P51681 352 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 ADPRHP54922 357 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 NXPH1P58417 271 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 TARDBPQ13148 414 aaKnown RBP eCLIP9.58□□□□□ -0.88
CNOT9-202ENST00000295701 CDH18Q13634 790 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 COBLL1Q53SF7 1204 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 HES3Q5TGS1 186 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 TBC1D3GQ6DHY5 549 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 TBC1D3CQ6IPX1 549 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 SND1Q7KZF4 910 aaKnown RBP eCLIP9.58□□□□□ -0.88
CNOT9-202ENST00000295701 CHSY1Q86X52 802 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 TBC1D3Q8IZP1 549 aaPredicted RBP9.58□□□□□ -0.88
CNOT9-202ENST00000295701 OR52K2Q8NGK3 314 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 FRS2Q8WU20 508 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 SERPINB11Q96P15 392 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 INSM2Q96T92 566 aaPredicted RBP9.58□□□□□ -0.88
CNOT9-202ENST00000295701 DDX50Q9BQ39 737 aaKnown RBP9.58□□□□□ -0.88
CNOT9-202ENST00000295701 SCAND2PQ9GZW5 306 aaPredicted RBP9.58□□□□□ -0.88
CNOT9-202ENST00000295701 ST7Q9NRC1 585 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 ARHGAP20Q9P2F6 1191 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 SARDHQ9UL12 918 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 CEP83Q9Y592 693 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 AK5Q9Y6K8 562 aa9.58□□□□□ -0.88
CNOT9-202ENST00000295701 SYNJ2BP-COX16A0A087WUM0 186 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 TLR4O00206 839 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 SDC3O75056 442 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 IL1BP01584 269 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 C5AR1P21730 350 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 EPHA8P29322 1005 aaPredicted RBP9.57□□□□□ -0.88
CNOT9-202ENST00000295701 ABCG1P45844 678 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 IRAK1P51617 712 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 KIF26BQ2KJY2 2108 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 CCDC40Q4G0X9 1142 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 KLHL10Q6JEL2 608 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 FBXL19Q6PCT2 694 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 KANSL1Q7Z3B3 1105 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 KDM1BQ8NB78 822 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 ENGASEQ8NFI3 743 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 SPATA20Q8TB22 786 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 KLK6Q92876 244 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 SMARCE1Q969G3 411 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 GSDMAQ96QA5 445 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 METTL14Q9HCE5 456 aaKnown RBP9.57□□□□□ -0.88
CNOT9-202ENST00000295701 GDF3Q9NR23 364 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 RMND1Q9NWS8 449 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 COX16Q9P0S2 106 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 FZD4Q9ULV1 537 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 PCDHGA1Q9Y5H4 931 aa9.57□□□□□ -0.88
CNOT9-202ENST00000295701 TYW5A2RUC4 315 aaKnown RBP9.56□□□□□ -0.88
CNOT9-202ENST00000295701 EIF4E1BA6NMX2 242 aaKnown RBP9.56□□□□□ -0.88
CNOT9-202ENST00000295701 E5RJQ4 531 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 RNF103O00237 685 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 CAPN9O14815 690 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 PMM2O15305 246 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 LILRA1O75019 489 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 C1QL1O75973 258 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 LETM1O95202 739 aaPredicted RBP9.56□□□□□ -0.88
CNOT9-202ENST00000295701 MOCS3O95396 460 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 TRUB2O95900 331 aaKnown RBP9.56□□□□□ -0.88
CNOT9-202ENST00000295701 IGLV3-25P01717 112 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 KRT5P13647 590 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 BMP6P22004 513 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 RXRGP48443 463 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 CENPCQ03188 943 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 LRRC63Q05C16 580 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 EIF4EBP2Q13542 120 aaPredicted RBP9.56□□□□□ -0.88
CNOT9-202ENST00000295701 STILQ15468 1287 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 INAVAQ3KP66 663 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms