RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 ADAMTS6Q9UKP5 1117 aa13.55□□□□□ -0.24
KCNIP3-201ENST00000295225 AIM2O14862 343 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 CFLARO15519 480 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 ZBTB14O43829 449 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 SOX4Q06945 474 aaPredicted RBP13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 PABPC1LQ4VXU2 614 aaKnown RBP13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 PAN2Q504Q3 1202 aaKnown RBP13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 OR52E8Q6IFG1 317 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 TMEM53Q6P2H8 277 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 PIWIL2Q8TC59 973 aaKnown RBP13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 TFB1MQ8WVM0 346 aaKnown RBP13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 EDEM1Q92611 657 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 DCPSQ96C86 337 aaKnown RBP13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 SPATA17Q96L03 361 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 OR52B2Q96RD2 323 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 SORT1Q99523 831 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 ZNF184Q99676 751 aaPredicted RBP13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 UQCC2Q9BRT2 126 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 FETUBQ9UGM5 382 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 SHROOM3Q8TF72 1996 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 SIP14410 1827 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 BCLAF3A2AJT9 711 aaKnown RBP13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 SDR42E2A6NKP2 422 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 PRSS47A8MTI9 375 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 H3BRB1 525 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 STX16-NPEPL1H3BU86 382 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 M0QYT0 321 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 PHGDHO43175 533 aaKnown RBP13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 SNX2O60749 519 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 TM7SF2O76062 418 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 TGDSO95455 350 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 JUNP05412 331 aaKnown RBP13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 P4HA1P13674 534 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 CPOXP36551 454 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 ARHGAP1Q07960 439 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 TUBB3Q13509 450 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 PLEKHG6Q3KR16 790 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 LGSNQ5TDP6 509 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 PAOXQ6QHF9 649 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 CATSPER4Q7RTX7 472 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 PLPPR4Q7Z2D5 763 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 ZNF567Q8N184 647 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 LRRC43Q8N309 656 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 KCNK16Q96T55 309 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 ATXN3LQ9H3M9 355 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 TUT1Q9H6E5 874 aaKnown RBP13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 CHRAC1Q9NRG0 131 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 ATXN10Q9UBB4 475 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 TTC3P53804 2025 aa13.54□□□□□ -0.24
KCNIP3-201ENST00000295225 SNNO75324 88 aaPredicted RBP13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 CIB2O75838 187 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 EPHA3P29320 983 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 CRHR1P34998 444 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 IDH3AP50213 366 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 AQP4P55087 323 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 SNX16P57768 344 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 ASPHQ12797 758 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 PDK2Q15119 407 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 TMEM40Q8WWA1 233 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 ZFP42Q96MM3 310 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 C7orf26Q96N11 449 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 OMDQ99983 421 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 UBE2OQ9C0C9 1292 aaKnown RBP13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 PPCSQ9HAB8 311 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 NDE1Q9NXR1 346 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 TXNDC16Q9P2K2 825 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 POLG2Q9UHN1 485 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 TMCO1Q9UM00 188 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 TK2O00142 265 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 PLIN3O60664 434 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 RECQL4O94761 1208 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 MT-CO1P00395 513 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 MYCP01106 439 aaPredicted RBP13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 TGM2P21980 687 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 HOXA11P31270 313 aaPredicted RBP13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 PKNOX1P55347 436 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 CDC16Q13042 620 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 TTLL4Q14679 1199 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 PIGZQ86VD9 579 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 OSTM1Q86WC4 334 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 MRGBPQ9NV56 204 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 CLIC5Q9NZA1 410 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 MOCS1Q9NZB8 636 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 SCOCQ9UIL1 159 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 APOBEC2Q9Y235 224 aaKnown RBP13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 LRCH1Q9Y2L9 728 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 TMEM233B4DJY2 109 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 CCDC166P0CW27 439 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 MCF2P10911 925 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 PSMA3P25788 255 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 GNL1P36915 607 aaPredicted RBP13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 MAP3K7CLP57077 242 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 INCA1Q0VD86 236 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 DLG1Q12959 904 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 GK3PQ14409 553 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 PKDCCQ504Y2 493 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 MARCH8Q5T0T0 291 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 PDPK2PQ6A1A2 396 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms