RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 PTCH2Q9Y6C5 1203 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 ERI2A8K979 691 aaKnown RBP15.37■□□□□ 0.05
CCDC116-201ENST00000292779 MTSS1O43312 755 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 LRIG2O94898 1065 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 F9P00740 461 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 CHRNA1P02708 482 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 ACADSP16219 412 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 TPH1P17752 444 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 HARS2P49590 506 aaKnown RBP15.37■□□□□ 0.05
CCDC116-201ENST00000292779 CXCR3P49682 368 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 DLG2Q15700 870 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 INTS6LQ5JSJ4 861 aaKnown RBP15.37■□□□□ 0.05
CCDC116-201ENST00000292779 ITPRIPL1Q6GPH6 555 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 GDF6Q6KF10 455 aaPredicted RBP15.37■□□□□ 0.05
CCDC116-201ENST00000292779 AGMOQ6ZNB7 445 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 LRRC74BQ6ZQY2 392 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 NET1Q7Z628 596 aaPredicted RBP15.37■□□□□ 0.05
CCDC116-201ENST00000292779 RSPH3Q86UC2 560 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 SMARCD1Q96GM5 515 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 EPAS1Q99814 870 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 C1orf21Q9H246 121 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 ARHGAP42A6NI28 874 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 SIN3BO75182 1162 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 DUSP11O75319 330 aaKnown RBP15.37■□□□□ 0.05
CCDC116-201ENST00000292779 IRF9Q00978 393 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 FRG1Q14331 258 aaKnown RBP15.37■□□□□ 0.05
CCDC116-201ENST00000292779 VWA5B1Q5TIE3 1220 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 KCNMB4Q86W47 210 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 CELF6Q96J87 481 aaKnown RBP15.37■□□□□ 0.05
CCDC116-201ENST00000292779 PANX3Q96QZ0 392 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 C20orf96Q9NUD7 363 aaPredicted RBP15.37■□□□□ 0.05
CCDC116-201ENST00000292779 DNAJC28Q9NX36 388 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 RRN3Q9NYV6 651 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 SLC7A8Q9UHI5 535 aa15.37■□□□□ 0.05
CCDC116-201ENST00000292779 A0A096LPK6 155 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.36■□□□□ 0.05
CCDC116-201ENST00000292779 F8W8V4 182 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 ZNF195O14628 629 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 CIB2O75838 187 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 JCHAINP01591 159 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 MYCNP04198 464 aaPredicted RBP15.36■□□□□ 0.05
CCDC116-201ENST00000292779 SERPINB6P35237 376 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 CPOXP36551 454 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 NPY2RP49146 381 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 PAN2Q504Q3 1202 aaKnown RBP15.36■□□□□ 0.05
CCDC116-201ENST00000292779 TIGD5Q53EQ6 642 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 ANO7Q6IWH7 933 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 RIPOR1Q6ZS17 1223 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 TAC4Q86UU9 113 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.36■□□□□ 0.05
CCDC116-201ENST00000292779 POU5F2Q8N7G0 328 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 ACVR1CQ8NER5 493 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 OR6Y1Q8NGX8 325 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 SCG3Q8WXD2 468 aaKnown RBP15.36■□□□□ 0.05
CCDC116-201ENST00000292779 MYLPFQ96A32 169 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 TEKT5Q96M29 485 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 OXCT2Q9BYC2 517 aaPredicted RBP15.36■□□□□ 0.05
CCDC116-201ENST00000292779 SENP6Q9GZR1 1112 aaPredicted RBP15.36■□□□□ 0.05
CCDC116-201ENST00000292779 SOX13Q9UN79 622 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 WASF2Q9Y6W5 498 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 LIN7AO14910 233 aaPredicted RBP15.36■□□□□ 0.05
CCDC116-201ENST00000292779 SEPT4O43236 478 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 SMNDC1O75940 238 aaKnown RBP eCLIP15.36■□□□□ 0.05
CCDC116-201ENST00000292779 KLHL2O95198 593 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 MPOP05164 745 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 ALOX15P16050 662 aaPredicted RBP15.36■□□□□ 0.05
CCDC116-201ENST00000292779 ERFP50548 548 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 CDK7P50613 346 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 MPP3Q13368 585 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 UPP1Q16831 310 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 NAPRTQ6XQN6 538 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 CLEC14AQ86T13 490 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 ZSCAN18Q8TBC5 510 aaPredicted RBP15.36■□□□□ 0.05
CCDC116-201ENST00000292779 URGCPQ8TCY9 931 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 MICAL1Q8TDZ2 1067 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 VAT1Q99536 393 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 RTP3Q9BQQ7 232 aa15.36■□□□□ 0.05
CCDC116-201ENST00000292779 AGO3Q9H9G7 860 aaKnown RBP15.36■□□□□ 0.05
CCDC116-201ENST00000292779 IARS2Q9NSE4 1012 aaKnown RBP15.36■□□□□ 0.05
CCDC116-201ENST00000292779 MAGEB16A2A368 324 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 CCDC78A2IDD5 438 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 G3V2L1 256 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 GOLGA8TH3BQL2 631 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 ADAMTS4O75173 837 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 PDHA1P08559 390 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 NMBRP28336 390 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 SLC25A3Q00325 362 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 TRMT5Q32P41 509 aaKnown RBP15.35■□□□□ 0.05
CCDC116-201ENST00000292779 MAP3K21Q5TCX8 1036 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 PM20D1Q6GTS8 502 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 OTOP3Q7RTS5 596 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 USP33Q8TEY7 942 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 DPF3Q92784 378 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 RNF34Q969K3 372 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 MTG1Q9BT17 334 aaPredicted RBP15.35■□□□□ 0.05
CCDC116-201ENST00000292779 OSBPL1AQ9BXW6 950 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 IL22Q9GZX6 179 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 FAM96AQ9H5X1 160 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 CSNK1G1Q9HCP0 422 aa15.35■□□□□ 0.05
CCDC116-201ENST00000292779 CHST12Q9NRB3 414 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms