RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 POU5F2Q8N7G0 328 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 URGCPQ8TCY9 931 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 RSPH1Q8WYR4 309 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 IRGQQ8WZA9 623 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 DPF3Q92784 378 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 SHCBP1LQ9BZQ2 653 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 BRD8Q9H0E9 1235 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 SLC39A10Q9ULF5 831 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 NEU3Q9UQ49 428 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 ERI2A8K979 691 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 SPECC1L-ADORA2AF8WAN1 911 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 C2P06681 752 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 GRIK1P39086 918 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 CCNG1P51959 295 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 SLC5A3P53794 718 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 THOC5Q13769 683 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 TMPRSS6Q8IU80 811 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 IPMKQ8NFU5 416 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 PKMYT1Q99640 499 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 THTPAQ9BU02 230 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 IL22Q9GZX6 179 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 CXorf56Q9H5V9 222 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 ZFYVE28Q9HCC9 887 aa18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 APOBEC2Q9Y235 224 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-201ENST00000291842 A0A0U1RQF3 1178 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 PAGE1O75459 146 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 NPY2RP49146 381 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 CDK18Q07002 472 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 CDH17Q12864 832 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 PRPSAP1Q14558 356 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 LPIN1Q14693 890 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 POU6F1Q14863 301 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 CCDC6Q16204 474 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 BTBD8Q5XKL5 378 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 CASP10Q92851 521 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 VPS39Q96JC1 886 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 VAT1Q99536 393 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 SPC25Q9HBM1 224 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 SOX13Q9UN79 622 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 RPL26L1Q9UNX3 145 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 AVPR1AP37288 418 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 MAGEA12P43365 314 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 IDH3AP50213 366 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 GRM3Q14832 879 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 KCNA10Q16322 511 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 DBN1Q16643 649 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 SDHAF4Q5VUM1 108 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 RAPH1Q70E73 1250 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 ARHGAP12Q8IWW6 846 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 ATPAF2Q8N5M1 289 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 SHKBP1Q8TBC3 707 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 MYCBPQ99417 103 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 ATXN3LQ9H3M9 355 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 TRMT13Q9NUP7 481 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 MPP6Q9NZW5 540 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 ADAM28Q9UKQ2 775 aa18.69■□□□□ 0.58
SHKBP1-201ENST00000291842 IRAK2O43187 625 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 CYP11A1P05108 521 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 GRK2P25098 689 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 TUSC3Q13454 348 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 CCDC153Q494R4 210 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 NAPEPLDQ6IQ20 393 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 SCN4BQ8IWT1 228 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 FCRL2Q96LA5 508 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 FAM167BQ9BTA0 163 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 SLC39A8Q9C0K1 460 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 YY1AP1Q9H869 796 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 MAN1C1Q9NR34 630 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 G3V2L1 256 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 PHGDHO43175 533 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 B4GALT3O60512 393 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 ZNF623O75123 536 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 SIN3BO75182 1162 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 RABGAP1LQ5R372 815 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 SPATA2LQ8IUW3 424 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 ZNF781Q8N8C0 355 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 OSBPL2Q9H1P3 480 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 NMRK2Q9NPI5 230 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 PLA2G4CQ9UP65 541 aa18.68■□□□□ 0.58
SHKBP1-201ENST00000291842 TDRD15B5MCY1 1934 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 MAGEB16A2A368 324 aa18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 M0QZQ0 153 aa18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 PSMG1O95456 288 aa18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 IGLV3-25P01717 112 aa18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 LMNAP02545 664 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 NCF2P19878 526 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 GLRBP48167 497 aa18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 TSPY1Q01534 308 aa18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 MFSD14CQ5VZR4 134 aa18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 SCUBE1Q8IWY4 988 aa18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 THEM5Q8N1Q8 247 aa18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 SH3TC2Q8TF17 1288 aa18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 STMN2Q93045 179 aa18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 ISL2Q96A47 359 aa18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 NAF1Q96HR8 494 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 MMADHCQ9H3L0 296 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 NMUR1Q9HB89 426 aa18.67■□□□□ 0.58
SHKBP1-201ENST00000291842 NMRAL1Q9HBL8 299 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms