RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 NRF1Q16656 503 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 THEM5Q8N1Q8 247 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 ATP6V1E2Q96A05 226 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 RCN3Q96D15 328 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 RMDN1Q96DB5 314 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 FAM96AQ9H5X1 160 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 SSU72Q9NP77 194 aaKnown RBP16.19■□□□□ 0.18
SMAD6-201ENST00000288840 XPO1O14980 1071 aaKnown RBP16.19■□□□□ 0.18
SMAD6-201ENST00000288840 COX4I1P13073 169 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 ABL2P42684 1182 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 CHRNA4P43681 627 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 OR1G1P47890 313 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 CDH17Q12864 832 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 AGKQ53H12 422 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 PPM1LQ5SGD2 360 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 OSTM1Q86WC4 334 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 CEP70Q8NHQ1 597 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 GABPB2Q8TAK5 448 aaPredicted RBP16.19■□□□□ 0.18
SMAD6-201ENST00000288840 IFT43Q96FT9 208 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 KLHL5Q96PQ7 755 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 TAF1LQ8IZX4 1826 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 CHRM1P11229 460 aaPredicted RBP16.19■□□□□ 0.18
SMAD6-201ENST00000288840 PSEN2P49810 448 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 TUBP50607 506 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 WASHC5Q12768 1159 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 FAM83EQ2M2I3 478 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 NOMO2Q5JPE7 1267 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 SLC9A4Q6AI14 798 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 LRRC8BQ6P9F7 803 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 LRRC52Q8N7C0 313 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 SKA1Q96BD8 255 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 PCED1BQ96HM7 432 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 PANX3Q96QZ0 392 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 KCNK13Q9HB14 408 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 MORF4L1Q9UBU8 362 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 ZNF212Q9UDV6 495 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 LRIG2O94898 1065 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 TGDSO95455 350 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 EFEMP1Q12805 493 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 SLC9B1Q4ZJI4 515 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 LCA5Q86VQ0 697 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 ABI1Q8IZP0 508 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 SCAMP5Q8TAC9 235 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 GATA5Q9BWX5 397 aaPredicted RBP16.18■□□□□ 0.18
SMAD6-201ENST00000288840 MRPL1Q9BYD6 325 aaKnown RBP16.18■□□□□ 0.18
SMAD6-201ENST00000288840 PFDN4Q9NQP4 134 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 STX18Q9P2W9 335 aaKnown RBP16.18■□□□□ 0.18
SMAD6-201ENST00000288840 CAPN8A6NHC0 703 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 TSHRP16473 764 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 IGFBP6P24592 240 aaPredicted RBP16.18■□□□□ 0.18
SMAD6-201ENST00000288840 PEX2P28328 305 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 ETV4P43268 484 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 IDH3AP50213 366 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 CDH13P55290 713 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 YWHAHQ04917 246 aaPredicted RBP16.18■□□□□ 0.18
SMAD6-201ENST00000288840 DUSP28Q4G0W2 176 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 TMEM259Q4ZIN3 620 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 SPANXN3Q5MJ09 141 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 RARS2Q5T160 578 aaKnown RBP16.18■□□□□ 0.18
SMAD6-201ENST00000288840 ZNF280DQ6N043 979 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 OR52B2Q96RD2 323 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 NPAS2Q99743 824 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 FTHL17Q9BXU8 183 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 GPAMQ9HCL2 828 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 SNX13Q9Y5W8 968 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 SOCS7O14512 581 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 WFS1O76024 890 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 TPSB2P20231 275 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 PTPN3P26045 913 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 SLC18A1P54219 525 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 HUNKP57058 714 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 TPSAB1Q15661 275 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 ARL13AQ5H913 290 aaPredicted RBP16.18■□□□□ 0.18
SMAD6-201ENST00000288840 IRGCQ6NXR0 463 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 BNC2Q6ZN30 1099 aaPredicted RBP16.18■□□□□ 0.18
SMAD6-201ENST00000288840 NT5DC4Q86YG4 428 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 EFHBQ8N7U6 833 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 TMEM40Q8WWA1 233 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 ZNF333Q96JL9 665 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 C16orf70Q9BSU1 422 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 COLEC11Q9BWP8 271 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 KLHL4Q9C0H6 718 aa16.18■□□□□ 0.18
SMAD6-201ENST00000288840 UTP6Q9NYH9 597 aaKnown RBP16.18■□□□□ 0.18
SMAD6-201ENST00000288840 RNF103-CHMP3A0A140T963 221 aa16.17■□□□□ 0.18
SMAD6-201ENST00000288840 TMEM233B4DJY2 109 aa16.17■□□□□ 0.18
SMAD6-201ENST00000288840 STX16-NPEPL1H3BU86 382 aa16.17■□□□□ 0.18
SMAD6-201ENST00000288840 THRAP10827 490 aa16.17■□□□□ 0.18
SMAD6-201ENST00000288840 PTPN9P43378 593 aa16.17■□□□□ 0.18
SMAD6-201ENST00000288840 INCA1Q0VD86 236 aa16.17■□□□□ 0.18
SMAD6-201ENST00000288840 NOL9Q5SY16 702 aaKnown RBP16.17■□□□□ 0.18
SMAD6-201ENST00000288840 ARCQ7LC44 396 aa16.17■□□□□ 0.18
SMAD6-201ENST00000288840 STRADAQ7RTN6 431 aa16.17■□□□□ 0.18
SMAD6-201ENST00000288840 FAM35AQ86V20 835 aa16.17■□□□□ 0.18
SMAD6-201ENST00000288840 KYQ8NBH2 561 aa16.17■□□□□ 0.18
SMAD6-201ENST00000288840 IPO11Q9UI26 975 aaKnown RBP16.17■□□□□ 0.18
SMAD6-201ENST00000288840 ZNF180Q9UJW8 692 aa16.17■□□□□ 0.18
SMAD6-201ENST00000288840 ANKRD31Q8N7Z5 1873 aa16.17■□□□□ 0.18
SMAD6-201ENST00000288840 FAM159BA6NKW6 160 aa16.17■□□□□ 0.18
SMAD6-201ENST00000288840 HACD1B0YJ81 288 aa16.17■□□□□ 0.18
SMAD6-201ENST00000288840 TEDDM1Q5T9Z0 273 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms