RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 TRPC5Q9UL62 973 aaPredicted RBP9.39□□□□□ -0.91
PDGFC-201ENST00000274071 ACOT8O14734 319 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 RAD51BO15315 384 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 NMT2O60551 498 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 DEAF1O75398 565 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 SEC14L2O76054 403 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 BMP4P12644 408 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 GFAPP14136 432 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 PIK3R1P27986 724 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 CYP2C18P33260 490 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 HAAOP46952 286 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 ALDH7A1P49419 539 aaKnown RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 IDH3AP50213 366 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 NUDT2P50583 147 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 MRPS5P82675 430 aaKnown RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 GAD2Q05329 585 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 GPS1Q13098 491 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 TARDBPQ13148 414 aaKnown RBP eCLIP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 AASDHQ4L235 1098 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 MSS51Q4VC12 460 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 CEP55Q53EZ4 464 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 GTF2IRD2BQ6EKJ0 949 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 ZBTB49Q6ZSB9 765 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 ADGRA1Q86SQ6 560 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 GTF2IRD2Q86UP8 949 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 GATAD2AQ86YP4 633 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 IFNL1Q8IU54 200 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 HID1Q8IV36 788 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 TCAIMQ8N3R3 496 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 CHAC2Q8WUX2 184 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 BCL7CQ8WUZ0 217 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 USP13Q92995 863 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 ADNPQ9H2P0 1102 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 SLA2Q9H6Q3 261 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 NOL11Q9H8H0 719 aaKnown RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 RPRD1BQ9NQG5 326 aaKnown RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 C20orf96Q9NUD7 363 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 PAQR5Q9NXK6 330 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 CPSF3Q9UKF6 684 aaKnown RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 HCN4Q9Y3Q4 1203 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 RIPK3Q9Y572 518 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 SNX13Q9Y5W8 968 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 SBF2Q86WG5 1849 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 TAF1LQ8IZX4 1826 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 TEX51A0A1B0GUA7 166 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 CENPXA8MT69 81 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 DLGAP1O14490 977 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 SOCS2O14508 198 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 BCAS1O75363 584 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 LYPLA1O75608 230 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 CLIC3O95833 236 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 CCND2P30279 289 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 PSMC2P35998 433 aaKnown RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 ARSEP51690 589 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 TRIM32Q13049 653 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 MTM1Q13496 603 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 TRPC3Q13507 836 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 IRF5Q13568 498 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 MORF4L2Q15014 288 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 PAGE2BQ5JRK9 111 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 VWA5B1Q5TIE3 1220 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 ZNF600Q6ZNG1 722 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 DSELQ8IZU8 1212 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 AFAP1L2Q8N4X5 818 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 SNX31Q8N9S9 440 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 LHFPL5Q8TAF8 219 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 LENG8Q96PV6 779 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 PCDHB18PQ96TA0 734 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 WDR83Q9BRX9 315 aaKnown RBP9.38□□□□□ -0.91
PDGFC-201ENST00000274071 TRPV6Q9H1D0 765 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 NUP50Q9UKX7 468 aa9.38□□□□□ -0.91
PDGFC-201ENST00000274071 TYW5A2RUC4 315 aaKnown RBP9.37□□□□□ -0.91
PDGFC-201ENST00000274071 LRRIQ4A6NIV6 560 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 NDUFA2O43678 99 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 ZBTB14O43829 449 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 CPNE6O95741 557 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 SPNP16150 400 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 KLRK1P26718 216 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 TM4SF1P30408 202 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 YAP1P46937 504 aaKnown RBP9.37□□□□□ -0.91
PDGFC-201ENST00000274071 POLR2GP62487 172 aaKnown RBP eCLIP9.37□□□□□ -0.91
PDGFC-201ENST00000274071 RNASEH2BQ5TBB1 312 aaKnown RBP9.37□□□□□ -0.91
PDGFC-201ENST00000274071 COLGALT2Q8IYK4 626 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 CLYBLQ8N0X4 340 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 REXO1Q8N1G1 1221 aaKnown RBP9.37□□□□□ -0.91
PDGFC-201ENST00000274071 AFG1LQ8WV93 481 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 CDKL2Q92772 493 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 CEP170P1Q96L14 293 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 MUC3BQ9H195 1237 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 LY75O60449 1722 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 CFLARO15519 480 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 DAB1O75553 588 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 DLGAP3O95886 979 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 EGFRP00533 1210 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 GSNP06396 782 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 PGK2P07205 417 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 ME2P23368 584 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 SERPINB5P36952 375 aa9.37□□□□□ -0.91
PDGFC-201ENST00000274071 TNFAIP2Q03169 654 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms