RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 ATG16L1Q676U5 607 aa20.6■□□□□ 0.89
UBE2F-201ENST00000272930 MFSD3Q96ES6 412 aa20.6■□□□□ 0.89
UBE2F-201ENST00000272930 B3GALT6Q96L58 329 aa20.6■□□□□ 0.89
UBE2F-201ENST00000272930 RBBP8Q99708 897 aa20.6■□□□□ 0.89
UBE2F-201ENST00000272930 KCNK13Q9HB14 408 aa20.6■□□□□ 0.89
UBE2F-201ENST00000272930 MPP6Q9NZW5 540 aa20.6■□□□□ 0.89
UBE2F-201ENST00000272930 ANXA9O76027 345 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 RTN3O95197 1032 aaPredicted RBP20.59■□□□□ 0.89
UBE2F-201ENST00000272930 TOP3BO95985 862 aaKnown RBP20.59■□□□□ 0.89
UBE2F-201ENST00000272930 DLDP09622 509 aaKnown RBP20.59■□□□□ 0.89
UBE2F-201ENST00000272930 MAGEA12P43365 314 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 ELF3P78545 371 aaPredicted RBP20.59■□□□□ 0.89
UBE2F-201ENST00000272930 GPR17Q13304 367 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 TEDDM1Q5T9Z0 273 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 FUT10Q6P4F1 479 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 NUDCD3Q8IVD9 361 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 SPATA22Q8NHS9 363 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 SPPL2BQ8TCT7 592 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 KLHL29Q96CT2 875 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 PPP1R2P1Q96PQ5 205 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 KIFC1Q9BW19 673 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 PRDM5Q9NQX1 630 aaPredicted RBP20.59■□□□□ 0.89
UBE2F-201ENST00000272930 ARHGEF3Q9NR81 526 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 TXLNGQ9NUQ3 528 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 DCDC2Q9UHG0 476 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 DCTN4Q9UJW0 460 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 EMCNQ9ULC0 261 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 MIA3Q5JRA6 1907 aa20.59■□□□□ 0.89
UBE2F-201ENST00000272930 MTMR11A4FU01 709 aa20.58■□□□□ 0.89
UBE2F-201ENST00000272930 ATP5HO75947 161 aa20.58■□□□□ 0.89
UBE2F-201ENST00000272930 GSRP00390 522 aa20.58■□□□□ 0.89
UBE2F-201ENST00000272930 NQO1P15559 274 aaKnown RBP20.58■□□□□ 0.89
UBE2F-201ENST00000272930 MAP2K2P36507 400 aa20.58■□□□□ 0.89
UBE2F-201ENST00000272930 PSEN1P49768 467 aa20.58■□□□□ 0.89
UBE2F-201ENST00000272930 PDE1BQ01064 536 aa20.58■□□□□ 0.89
UBE2F-201ENST00000272930 BST1Q10588 318 aa20.58■□□□□ 0.89
UBE2F-201ENST00000272930 INSCQ1MX18 579 aa20.58■□□□□ 0.89
UBE2F-201ENST00000272930 TCTN1Q2MV58 587 aa20.58■□□□□ 0.89
UBE2F-201ENST00000272930 TBC1D1Q86TI0 1168 aaPredicted RBP20.58■□□□□ 0.89
UBE2F-201ENST00000272930 FBXO32Q969P5 355 aa20.58■□□□□ 0.89
UBE2F-201ENST00000272930 SPATA17Q96L03 361 aa20.58■□□□□ 0.89
UBE2F-201ENST00000272930 NOL6Q9H6R4 1146 aaKnown RBP20.58■□□□□ 0.89
UBE2F-201ENST00000272930 CHRAC1Q9NRG0 131 aa20.58■□□□□ 0.89
UBE2F-201ENST00000272930 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.58■□□□□ 0.89
UBE2F-201ENST00000272930 PPARGC1AQ9UBK2 798 aaKnown RBP20.58■□□□□ 0.89
UBE2F-201ENST00000272930 HCSTQ9UBK5 93 aa20.58■□□□□ 0.89
UBE2F-201ENST00000272930 LRFN2Q9ULH4 789 aa20.58■□□□□ 0.89
UBE2F-201ENST00000272930 MGRN1O60291 552 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 FKTNO75072 461 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 VNN2O95498 520 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 CPB1P15086 417 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 TPH1P17752 444 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 SPRP35270 261 aaPredicted RBP20.58■□□□□ 0.88
UBE2F-201ENST00000272930 PAPOLAP51003 745 aaKnown RBP20.58■□□□□ 0.88
UBE2F-201ENST00000272930 LIMK2P53671 638 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 TMPRSS15P98073 1019 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 OCRLQ01968 901 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 SMARCB1Q12824 385 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 ELAVL2Q12926 359 aaKnown RBP20.58■□□□□ 0.88
UBE2F-201ENST00000272930 ARHGEF6Q15052 776 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 CHI3L2Q15782 390 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 MS4A13Q5J8X5 152 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 CES4AQ5XG92 561 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 RSPO2Q6UXX9 243 aaPredicted RBP20.58■□□□□ 0.88
UBE2F-201ENST00000272930 NPAS4Q8IUM7 802 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 UMODL1-AS1Q8N2C9 162 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 GPR152Q8TDT2 470 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 ATP2A3Q93084 1043 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 TBL1YQ9BQ87 522 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 TMEM175Q9BSA9 504 aa20.58■□□□□ 0.88
UBE2F-201ENST00000272930 OLA1Q9NTK5 396 aaKnown RBP20.58■□□□□ 0.88
UBE2F-201ENST00000272930 HOXA2O43364 376 aa20.57■□□□□ 0.88
UBE2F-201ENST00000272930 MT-CYBP00156 380 aaPredicted RBP20.57■□□□□ 0.88
UBE2F-201ENST00000272930 HLA-DQB2P05538 268 aa20.57■□□□□ 0.88
UBE2F-201ENST00000272930 RHOQP17081 205 aa20.57■□□□□ 0.88
UBE2F-201ENST00000272930 KCNJ2P63252 427 aa20.57■□□□□ 0.88
UBE2F-201ENST00000272930 EFEMP1Q12805 493 aa20.57■□□□□ 0.88
UBE2F-201ENST00000272930 TRIP4Q15650 581 aaPredicted RBP20.57■□□□□ 0.88
UBE2F-201ENST00000272930 SMAD1Q15797 465 aaKnown RBP20.57■□□□□ 0.88
UBE2F-201ENST00000272930 CCDC117Q8IWD4 279 aaPredicted RBP20.57■□□□□ 0.88
UBE2F-201ENST00000272930 FATE1Q969F0 183 aa20.57■□□□□ 0.88
UBE2F-201ENST00000272930 AGAP2Q99490 1192 aa20.57■□□□□ 0.88
UBE2F-201ENST00000272930 MCMBPQ9BTE3 642 aa20.57■□□□□ 0.88
UBE2F-201ENST00000272930 MRPL9Q9BYD2 267 aaKnown RBP20.57■□□□□ 0.88
UBE2F-201ENST00000272930 CRISPLD1Q9H336 500 aa20.57■□□□□ 0.88
UBE2F-201ENST00000272930 TLR8Q9NR97 1041 aaKnown RBP20.57■□□□□ 0.88
UBE2F-201ENST00000272930 COMMD8Q9NX08 183 aa20.57■□□□□ 0.88
UBE2F-201ENST00000272930 IGLV3-10A0A075B6K4 115 aa20.56■□□□□ 0.88
UBE2F-201ENST00000272930 A0A0G2JND7 137 aa20.56■□□□□ 0.88
UBE2F-201ENST00000272930 SNNO75324 88 aaPredicted RBP20.56■□□□□ 0.88
UBE2F-201ENST00000272930 SOAT2O75908 522 aa20.56■□□□□ 0.88
UBE2F-201ENST00000272930 GALTP07902 379 aa20.56■□□□□ 0.88
UBE2F-201ENST00000272930 ADRA1AP35348 466 aa20.56■□□□□ 0.88
UBE2F-201ENST00000272930 NDST2P52849 883 aa20.56■□□□□ 0.88
UBE2F-201ENST00000272930 ARFIP2P53365 341 aa20.56■□□□□ 0.88
UBE2F-201ENST00000272930 GEMP55040 296 aa20.56■□□□□ 0.88
UBE2F-201ENST00000272930 ARPP19P56211 112 aa20.56■□□□□ 0.88
UBE2F-201ENST00000272930 HSP90AA5PQ58FG0 334 aa20.56■□□□□ 0.88
UBE2F-201ENST00000272930 RTP2Q5QGT7 225 aa20.56■□□□□ 0.88
UBE2F-201ENST00000272930 N4BP2L1Q5TBK1 243 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms