RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 PARNO95453 639 aaKnown RBP13.46□□□□□ -0.25
PRDM16-201ENST00000270722 ITGB3P05106 788 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 ANXA5P08758 320 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 FAM228BP0C875 321 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 FGFR1P11362 822 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 AKR1B1P15121 316 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 EN1Q05925 392 aaPredicted RBP13.46□□□□□ -0.25
PRDM16-201ENST00000270722 TRIM32Q13049 653 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 OVOS1Q6IE37 1185 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 ERMAPQ96PL5 475 aaPredicted RBP13.46□□□□□ -0.25
PRDM16-201ENST00000270722 PHGDHO43175 533 aaKnown RBP13.46□□□□□ -0.26
PRDM16-201ENST00000270722 CRABP2P29373 138 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 GMPSP49915 693 aaPredicted RBP13.46□□□□□ -0.26
PRDM16-201ENST00000270722 CCR4P51679 360 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 MARSP56192 900 aaKnown RBP13.46□□□□□ -0.26
PRDM16-201ENST00000270722 MYL6P60660 151 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 ILF3Q12906 894 aaKnown RBP eCLIP13.46□□□□□ -0.26
PRDM16-201ENST00000270722 TYW3Q6IPR3 259 aaKnown RBP13.46□□□□□ -0.26
PRDM16-201ENST00000270722 SMYD1Q8NB12 490 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 TBC1D15Q8TC07 691 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 CPA5Q8WXQ8 436 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 PPP1R10Q96QC0 940 aaKnown RBP13.46□□□□□ -0.26
PRDM16-201ENST00000270722 TTC26A0AVF1 554 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 EFCAB10A6NFE3 127 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 CHURC1-FNTBB4DL54 471 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 EPHX2P34913 555 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 EFEMP1Q12805 493 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 LYPLAL1Q5VWZ2 237 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 CKAP2Q8WWK9 683 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 SOHLH2Q9NX45 425 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 DMTF1Q9Y222 760 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 IRAK3Q9Y616 596 aa13.46□□□□□ -0.26
PRDM16-201ENST00000270722 TUBAL3A6NHL2 446 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CENPBD1B2RD01 187 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 STAU1O95793 577 aaKnown RBP13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CSH1P0DML2 217 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CSH2P0DML3 217 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 GRM3Q14832 879 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 ACOX1Q15067 660 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 PTGISQ16647 500 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 ANKMY2Q8IV38 441 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 FAM172AQ8WUF8 416 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 Q96MT0 163 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 NMRAL1Q9HBL8 299 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 SLC12A8A0AV02 714 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 H3BNX3 289 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CBX4O00257 560 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CCNDBP1O95273 360 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 UMPSP11172 480 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 DSG3P32926 999 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 MAPK11Q15759 364 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CBWD3Q5JTY5 395 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CBWD5Q5RIA9 395 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 MZT2AQ6P582 158 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CEP68Q76N32 757 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 ATP6V1C2Q8NEY4 427 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CELF1Q92879 486 aaKnown RBP13.45□□□□□ -0.26
PRDM16-201ENST00000270722 GAS2L1Q99501 681 aaPredicted RBP13.45□□□□□ -0.26
PRDM16-201ENST00000270722 SQORQ9Y6N5 450 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 TDP2O95551 362 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CYP11B2P19099 503 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 TMEM62Q0P6H9 643 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 NR6A1Q15406 480 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 FBXO47Q5MNV8 452 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 AMER2Q8N7J2 671 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 ASB12Q8WXK4 309 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 SSX3Q99909 188 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 REEP2Q9BRK0 252 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 SPATA7Q9P0W8 599 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 TSTD3H0UI37 97 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 ASGR1P07306 291 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 GZMAP12544 262 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CD79BP40259 229 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 NUDT2P50583 147 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 ZSWIM7Q19AV6 140 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CCDC81Q6ZN84 652 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 IFNL1Q8IU54 200 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 RORBQ92753 470 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 DAGLAQ9Y4D2 1042 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 SNX8Q9Y5X2 465 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 NUDT7P0C024 238 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 GPR158Q5T848 1215 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 KCNK18Q7Z418 384 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 TMEM86AQ8N2M4 240 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 TRPV3Q8NET8 790 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 OR4C6Q8NH72 309 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 MED8Q96G25 268 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 METTL5Q9NRN9 209 aaKnown RBP13.45□□□□□ -0.26
PRDM16-201ENST00000270722 KCNH7Q9NS40 1196 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 TMEM216Q9P0N5 145 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 TDRKHQ9Y2W6 561 aaKnown RBP13.45□□□□□ -0.26
PRDM16-201ENST00000270722 KCNIP3Q9Y2W7 256 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 SAMD9LQ8IVG5 1584 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 ERI2A8K979 691 aaKnown RBP13.45□□□□□ -0.26
PRDM16-201ENST00000270722 GALCP54803 685 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 MEA1Q16626 185 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 FNDC3BQ53EP0 1204 aaKnown RBP13.45□□□□□ -0.26
PRDM16-201ENST00000270722 AMACRQ9UHK6 382 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CASC3O15234 703 aaKnown RBP13.45□□□□□ -0.26
PRDM16-201ENST00000270722 RGS10O43665 173 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms