RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 KLHL41O60662 606 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 PDHA1P08559 390 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 TARSP26639 723 aaKnown RBP13.94□□□□□ -0.18
NPC1-201ENST00000269228 HPCAP84074 193 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 KCTD19Q17RG1 926 aaPredicted RBP13.94□□□□□ -0.18
NPC1-201ENST00000269228 FUT11Q495W5 492 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 TRAPPC5Q8IUR0 188 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 TFAP2BQ92481 460 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 KLHL5Q96PQ7 755 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 ATP13A3Q9H7F0 1226 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 NMRAL1Q9HBL8 299 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 TMEM161AQ9NX61 479 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 ITM2BQ9Y287 266 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 H3BQF6 201 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 BTN3A1O00481 513 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 LMO2P25791 158 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 SH3BGRP55822 239 aaPredicted RBP13.94□□□□□ -0.18
NPC1-201ENST00000269228 GDF6Q6KF10 455 aaPredicted RBP13.94□□□□□ -0.18
NPC1-201ENST00000269228 SMG7Q92540 1137 aaKnown RBP13.94□□□□□ -0.18
NPC1-201ENST00000269228 PANX3Q96QZ0 392 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 RBBP8Q99708 897 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 MFSD1Q9H3U5 465 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 SELENONQ9NZV5 590 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 FAM95CA0A1B0GW59 222 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 RAD51BO15315 384 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 CDC16Q13042 620 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 ZNF662Q6ZS27 426 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 ASB8Q9H765 288 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 BPIFA1Q9NP55 256 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 ARVCFO00192 962 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 PLK1P53350 603 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 ZNF792Q3KQV3 632 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 MCOLN3Q8TDD5 553 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 KLC4Q9NSK0 619 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 KDM3BQ7LBC6 1761 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 IL1BP01584 269 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 ATP6V1E1P36543 226 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 MAPK8P45983 427 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 KIAA1324Q6UXG2 1013 aaKnown RBP13.94□□□□□ -0.18
NPC1-201ENST00000269228 MARK2Q7KZI7 788 aaKnown RBP13.94□□□□□ -0.18
NPC1-201ENST00000269228 APOPT1Q96IL0 206 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 MINDY3Q9H8M7 445 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 CHCHD3Q9NX63 227 aaKnown RBP13.94□□□□□ -0.18
NPC1-201ENST00000269228 SPACA6W5XKT8 324 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 PDE4DIPQ5VU43 2346 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 MYH2Q9UKX2 1941 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 MGAT4DA6NG13 374 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 SYN3O14994 580 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 TRIM13O60858 407 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 BANF1O75531 89 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 TFE3P19532 575 aaPredicted RBP13.93□□□□□ -0.18
NPC1-201ENST00000269228 GPC1P35052 558 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 PFKPQ01813 784 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 FSTL1Q12841 308 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 NR6A1Q15406 480 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 SUGP1Q8IWZ8 645 aaKnown RBP13.93□□□□□ -0.18
NPC1-201ENST00000269228 BTN2A3PQ96KV6 586 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 AGO1Q9UL18 857 aaKnown RBP13.93□□□□□ -0.18
NPC1-201ENST00000269228 ARHGAP26Q9UNA1 814 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 NEDD8-MDP1E9PL57 170 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 TKTP29401 623 aaKnown RBP13.93□□□□□ -0.18
NPC1-201ENST00000269228 PRIM2P49643 509 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 CCDC153Q494R4 210 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 PRSS55Q6UWB4 352 aaPredicted RBP13.93□□□□□ -0.18
NPC1-201ENST00000269228 HNRNPABQ99729 332 aaKnown RBP13.93□□□□□ -0.18
NPC1-201ENST00000269228 MAPK1P28482 360 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 MAPK9P45984 424 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 UNC5AQ6ZN44 842 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 MON1BQ7L1V2 547 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 TSEN2Q8NCE0 465 aaKnown RBP13.93□□□□□ -0.18
NPC1-201ENST00000269228 TMEM120AQ9BXJ8 343 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 KCND1Q9NSA2 647 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 SEC24DO94855 1032 aaPredicted RBP13.93□□□□□ -0.18
NPC1-201ENST00000269228 THOP1P52888 689 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 RABGGTBP53611 331 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 TP53BP2Q13625 1128 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 TMEM63BQ5T3F8 832 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 FAM228AQ86W67 206 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 CHPFQ8IZ52 775 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 CXorf40AQ8TE69 158 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 DQX1Q8TE96 717 aaKnown RBP13.93□□□□□ -0.18
NPC1-201ENST00000269228 PWWP2AQ96N64 755 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 PCDHGC3Q9UN70 934 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 Q9Y3F1 56 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 RAD54BQ9Y620 910 aa13.93□□□□□ -0.18
NPC1-201ENST00000269228 SLCO1B7G3V0H7 640 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 CORO1AP31146 461 aaKnown RBP13.92□□□□□ -0.18
NPC1-201ENST00000269228 RFX3P48380 749 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 AIF1P55008 147 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 SLC44A2Q8IWA5 706 aaPredicted RBP13.92□□□□□ -0.18
NPC1-201ENST00000269228 P2RY11Q96G91 374 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 C1QTNF7Q9BXJ2 289 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 FBXO6Q9NRD1 293 aaPredicted RBP13.92□□□□□ -0.18
NPC1-201ENST00000269228 TMPRSS4Q9NRS4 437 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 KRT6AP02538 564 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 KRT6BP04259 564 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 PBX3P40426 434 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 KRT6CP48668 564 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 JAM2P57087 298 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 SKOR1P84550 965 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms