RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TRPC7Q9HCX4 862 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 ZFP37Q9Y6Q3 630 aaPredicted RBP16.72■□□□□ 0.27
TPM1-201ENST00000267996 MYO7AQ13402 2215 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 PSMD3O43242 534 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 CDH16O75309 829 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 CA3P07451 260 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 IRF1P10914 325 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 NR1D1P20393 614 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 OR1E1P30953 314 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 HOXA9P31269 272 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 MAGOHP61326 146 aaKnown RBP16.71■□□□□ 0.27
TPM1-201ENST00000267996 ERVK-21P61565 698 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 ZXDBP98169 803 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 CYP4F8P98187 520 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 SERINC3Q13530 473 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 POLD3Q15054 466 aaPredicted RBP16.71■□□□□ 0.27
TPM1-201ENST00000267996 SHHQ15465 462 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 PDE12Q6L8Q7 609 aaKnown RBP16.71■□□□□ 0.27
TPM1-201ENST00000267996 Q6ZNB5 142 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 CFAP52Q8N1V2 620 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 TEX26Q8N6G2 289 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 TGS1Q96RS0 853 aaKnown RBP16.71■□□□□ 0.27
TPM1-201ENST00000267996 EBNA1BP2Q99848 306 aaKnown RBP16.71■□□□□ 0.27
TPM1-201ENST00000267996 STMN4Q9H169 189 aaPredicted RBP16.71■□□□□ 0.27
TPM1-201ENST00000267996 GLOD4Q9HC38 313 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 RBM22Q9NW64 420 aaKnown RBP eCLIP16.71■□□□□ 0.27
TPM1-201ENST00000267996 SMPD4Q9NXE4 827 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 SLC24A2Q9UI40 661 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 PCDHA11Q9Y5I1 949 aa16.71■□□□□ 0.27
TPM1-201ENST00000267996 EXOC1LA0A1B0GW35 172 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 J3KR12 359 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 NRG2O14511 850 aaPredicted RBP16.7■□□□□ 0.26
TPM1-201ENST00000267996 CCL16O15467 120 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 CLASP2O75122 1294 aaKnown RBP16.7■□□□□ 0.26
TPM1-201ENST00000267996 CLDN11O75508 207 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 C1QAP02745 245 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 MAGEA10P43363 369 aaPredicted RBP16.7■□□□□ 0.26
TPM1-201ENST00000267996 RPS24P62847 133 aaKnown RBP16.7■□□□□ 0.26
TPM1-201ENST00000267996 IL10RBQ08334 325 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 PRPSAP1Q14558 356 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 CAPN12Q6ZSI9 719 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 FAM217AQ8IXS0 508 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 MICAL1Q8TDZ2 1067 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 FBF1Q8TES7 1133 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 USP33Q8TEY7 942 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 OXNAD1Q96HP4 312 aaPredicted RBP16.7■□□□□ 0.26
TPM1-201ENST00000267996 PPP1R2P1Q96PQ5 205 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 MAGEH1Q9H213 219 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 CASS4Q9NQ75 786 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 ASAH2Q9NR71 780 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 CPQQ9Y646 472 aa16.7■□□□□ 0.26
TPM1-201ENST00000267996 SDR42E2A6NKP2 422 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 CPP00450 1065 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 HLA-DQB2P05538 268 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 RENBPP51606 427 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 TTC39BQ5VTQ0 682 aaPredicted RBP16.69■□□□□ 0.26
TPM1-201ENST00000267996 STEAP4Q687X5 459 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 OTOP3Q7RTS5 596 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 MPP5Q8N3R9 675 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 GBF1Q92538 1859 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 ARHGEF2Q92974 986 aaKnown RBP16.69■□□□□ 0.26
TPM1-201ENST00000267996 GCNAQ96QF7 691 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 CORO1BQ9BR76 489 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 DHRS4Q9BTZ2 278 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 LRRC40Q9H9A6 602 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 MAN1C1Q9NR34 630 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 PSD3Q9NYI0 1048 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 ZC3H7BQ9UGR2 993 aaKnown RBP16.69■□□□□ 0.26
TPM1-201ENST00000267996 TRAV19A0A0A6YYK7 116 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 A0A1B0GVM2 712 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 A0A1W2PRU2 124 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 TCRBV9S1A1TA0A576 114 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 TCAF2A6NFQ2 919 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 TRDMT1O14717 391 aaKnown RBP16.69■□□□□ 0.26
TPM1-201ENST00000267996 PRAMEF11O60813 436 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 CSPG5O95196 566 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 FGF19O95750 216 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 ACVRL1P37023 503 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 SGSHP51688 502 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 GNA12Q03113 381 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 SPARCL1Q14515 664 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 TERF2Q15554 542 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 KLHL38Q2WGJ6 581 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 CYS1Q717R9 158 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 ARFGAP2Q8N6H7 521 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 MAB21L3Q8N8X9 362 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 ARNTL2Q8WYA1 636 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 XPO6Q96QU8 1125 aaKnown RBP16.69■□□□□ 0.26
TPM1-201ENST00000267996 ATXN3LQ9H3M9 355 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 PDFQ9HBH1 243 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 CTNNAL1Q9UBT7 734 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 TBC1D30Q9Y2I9 924 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 AAR2Q9Y312 384 aaKnown RBP16.69■□□□□ 0.26
TPM1-201ENST00000267996 TTLL3Q9Y4R7 772 aa16.69■□□□□ 0.26
TPM1-201ENST00000267996 DOCK6Q96HP0 2047 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 ILVBLA1L0T0 632 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 RFPL2O75678 378 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 ANXA9O76027 345 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 POU2F2P09086 479 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 HNRNPA1P09651 372 aaKnown RBP eCLIP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms