RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MORF4L1Q9UBU8 362 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 PIN4Q9Y237 131 aaKnown RBP17.13■□□□□ 0.33
SQLE-201ENST00000265896 YJEFN3A6XGL0 299 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 KIF3CO14782 793 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 ALDH1A2O94788 518 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 RTN3O95197 1032 aaPredicted RBP17.12■□□□□ 0.33
SQLE-201ENST00000265896 PYGLP06737 847 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 RPS12P25398 132 aaKnown RBP17.12■□□□□ 0.33
SQLE-201ENST00000265896 PTPN3P26045 913 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 MPP3Q13368 585 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 CEACAM7Q14002 265 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 ANKRD20A4Q4UJ75 823 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 C9orf57Q5W0N0 161 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 RWDD4Q6NW29 188 aaKnown RBP17.12■□□□□ 0.33
SQLE-201ENST00000265896 GK5Q6ZS86 529 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 SLC26A9Q7LBE3 791 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 RBBP8Q99708 897 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 ACE2Q9BYF1 805 aaPredicted RBP17.12■□□□□ 0.33
SQLE-201ENST00000265896 TRIM8Q9BZR9 551 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 PARP14Q460N5 1801 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 NCAM1P13591 858 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 CDKL1Q00532 357 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 FBXO47Q5MNV8 452 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 OLFML2BQ68BL8 750 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 EPGNQ6UW88 154 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 TIFABQ6ZNK6 161 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 ANKRD52Q8NB46 1076 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 TMEM40Q8WWA1 233 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 LRGUKQ96M69 825 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 LRRC4Q9HBW1 653 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 GPAMQ9HCL2 828 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 SLC2A6Q9UGQ3 507 aa17.12■□□□□ 0.33
SQLE-201ENST00000265896 ZCWPW2A0A1B0GU75 182 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 KPNA7A9QM74 516 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 GAS2O43903 313 aaKnown RBP17.11■□□□□ 0.33
SQLE-201ENST00000265896 TRIM13O60858 407 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 PTPN1P18031 435 aaKnown RBP17.11■□□□□ 0.33
SQLE-201ENST00000265896 MATKP42679 507 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 GRIK4Q16099 956 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 GSTA3Q16772 222 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 PKP2Q99959 881 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 MLPHQ9BV36 600 aaPredicted RBP17.11■□□□□ 0.33
SQLE-201ENST00000265896 TMEM30AQ9NV96 361 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 GTSE1Q9NYZ3 720 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 BFARQ9NZS9 450 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 TTC24A2A3L6 582 aaPredicted RBP17.11■□□□□ 0.33
SQLE-201ENST00000265896 VAPBO95292 243 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 GRK2P25098 689 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 CD68P34810 354 aaPredicted RBP17.11■□□□□ 0.33
SQLE-201ENST00000265896 NR2C2P49116 596 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 BCAT1P54687 386 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 SLC5A9Q2M3M2 681 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 WSCD1Q658N2 575 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 NT5DC4Q86YG4 428 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 IPMKQ8NFU5 416 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 IL1RL2Q9HB29 575 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 CHST12Q9NRB3 414 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 DDIT4Q9NX09 232 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 MKS1Q9NXB0 559 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 PCDHB12Q9Y5F1 795 aa17.11■□□□□ 0.33
SQLE-201ENST00000265896 DFFAO00273 331 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 TFEBP19484 476 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 SPRP35270 261 aaPredicted RBP17.1■□□□□ 0.33
SQLE-201ENST00000265896 FDFT1P37268 417 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 GARSP41250 739 aaKnown RBP17.1■□□□□ 0.33
SQLE-201ENST00000265896 TKTL1P51854 596 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 MTTPP55157 894 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 FBXO48Q5FWF7 155 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 MARCH8Q5T0T0 291 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 STEAP4Q687X5 459 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 LDB1Q86U70 411 aaPredicted RBP17.1■□□□□ 0.33
SQLE-201ENST00000265896 KBTBD6Q86V97 674 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 SIX6OS1Q8N1H7 587 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 PQLC1Q8N2U9 271 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 NAT14Q8WUY8 206 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 KLHL32Q96NJ5 620 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 ULBP1Q9BZM6 244 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 VRTNQ9H8Y1 702 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 ZNF408Q9H9D4 720 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 GPRC5DQ9NZD1 345 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 XPR1Q9UBH6 696 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 ANKRD12Q6UB98 2062 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 KCNU1A8MYU2 1149 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 ZFXP17010 805 aaPredicted RBP17.1■□□□□ 0.33
SQLE-201ENST00000265896 EPHX2P34913 555 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 RPS6KA3P51812 740 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 PPP1R3AQ16821 1122 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 AMIGO2Q86SJ2 522 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 ZBTB46Q86UZ6 589 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 METTL25Q8N6Q8 603 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 EXT2Q93063 718 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 RNF34Q969K3 372 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 ATP6V1E2Q96A05 226 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 NXNL1Q96CM4 212 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 RPL10LQ96L21 214 aaKnown RBP17.1■□□□□ 0.33
SQLE-201ENST00000265896 C11orf84Q9BUA3 381 aaPredicted RBP17.1■□□□□ 0.33
SQLE-201ENST00000265896 GCOM2Q9BZD3 368 aaPredicted RBP17.1■□□□□ 0.33
SQLE-201ENST00000265896 ILKAPQ9H0C8 392 aaPredicted RBP17.1■□□□□ 0.33
SQLE-201ENST00000265896 SPON1Q9HCB6 807 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 DNAJC28Q9NX36 388 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms