RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 GRAP2O75791 330 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 GYPCP04921 128 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 VDRP11473 427 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 PTDSS1P48651 473 aaKnown RBP5.54□□□□□ -1.52
XRN1-201ENST00000264951 SGO1Q5FBB7 561 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 ERMARDQ5T6L9 678 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 DENND6BQ8NEG7 585 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 TEX47Q8TBZ9 253 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 DNAJA4Q8WW22 397 aaPredicted RBP5.54□□□□□ -1.52
XRN1-201ENST00000264951 CPNE2Q96FN4 548 aaPredicted RBP5.54□□□□□ -1.52
XRN1-201ENST00000264951 ZNF341Q9BYN7 854 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 DNAAF2Q9NVR5 837 aaKnown RBP5.54□□□□□ -1.52
XRN1-201ENST00000264951 GNEQ9Y223 722 aaKnown RBP5.54□□□□□ -1.52
XRN1-201ENST00000264951 PTGES3LE9PB15 166 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PROSCO94903 275 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 SLC6A4P31645 630 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 HNF4AP41235 474 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TAF6P49848 677 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 VMACQ2NL98 169 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PGBD2Q6P3X8 592 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 LRRC69Q6ZNQ3 347 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TMC8Q8IU68 726 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 STAG3L4Q8TBR4 150 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 AGAP3Q96P47 875 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 RBM4BQ9BQ04 359 aaKnown RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 RBM4Q9BWF3 364 aaKnown RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 KCNH4Q9UQ05 1017 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 CEP170Q5SW79 1584 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 SAMD9LQ8IVG5 1584 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TCP10L2B9ZVM9 353 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 NUAK1O60285 661 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PLIN3O60664 434 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 GCATO75600 419 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 FCER1AP12319 257 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PHKG2P15735 406 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 EPHB2P29323 1055 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TUFMP49411 452 aaKnown RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 FGD3Q5JSP0 725 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 CIAPIN1Q6FI81 312 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 ZNF467Q7Z7K2 595 aaPredicted RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 C11orf74Q86VG3 221 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 LRRC71Q8N4P6 559 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 ZNF540Q8NDQ6 660 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 HEXDCQ8WVB3 486 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 CASKIN2Q8WXE0 1202 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TMEM168Q9H0V1 697 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 EPB41L1Q9H4G0 881 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TBCCD1Q9NVR7 557 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 DNAJB4Q9UDY4 337 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 SPEF1Q9Y4P9 236 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PCDHGA3Q9Y5H0 932 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 A2ML1A8K2U0 1454 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 AP3D1O14617 1153 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TULP3O75386 442 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 KRT36O76013 467 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 ERBB2P04626 1255 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PET100P0DJ07 73 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 RPA1P27694 616 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 SLC26A2P50443 739 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 LRRC38Q5VT99 294 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 KBTBD2Q8IY47 623 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 HTATIP2Q9BUP3 242 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 IL22Q9GZX6 179 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PUS7LQ9H0K6 701 aaKnown RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 LY9Q9HBG7 655 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 NMRK2Q9NPI5 230 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 MTMR10Q9NXD2 777 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 V9GYQ6 96 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 ADGRL2O95490 1459 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 A0A1B0GVC2 190 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PDCD5O14737 125 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 MAPTP10636 758 aaKnown RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 NME5P56597 212 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 ELF3P78545 371 aaPredicted RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 CREMQ03060 361 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PLD1Q13393 1074 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 FBXO43Q4G163 708 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TDRD10Q5VZ19 366 aaKnown RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 DDX53Q86TM3 631 aaKnown RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 ANKZF1Q9H8Y5 726 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 RNF146Q9NTX7 359 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 ZNF224Q9NZL3 707 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PSMD13Q9UNM6 376 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 KIF28PB7ZC32 967 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PLOD2O00469 737 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 SLC30A4O14863 429 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 SERPINA3P01011 423 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 A1BGP04217 495 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 OR56A5P0C7T3 313 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 FAM228BP0C875 321 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 ATP6V0D1P61421 351 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 ARID5BQ14865 1188 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 USF2Q15853 346 aaPredicted RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 PGS1Q32NB8 556 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TMC3Q7Z5M5 1100 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 SLFN11Q7Z7L1 901 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 ZNF567Q8N184 647 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 ZCCHC9Q8N567 271 aaKnown RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 METTL6Q8TCB7 284 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 ZKSCAN4Q969J2 545 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms