RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 PNMA8CA0A1B0GUJ8 204 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 EPN2O95208 641 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 KRT73Q86Y46 540 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 AGAP11Q8TF27 550 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 ARHGAP28Q9P2N2 729 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 C2CD2Q9Y426 696 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 OR56A5P0C7T3 313 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 ZNF268Q14587 947 aaPredicted RBP18.26■□□□□ 0.51
COL5A3-201ENST00000264828 POLNQ7Z5Q5 900 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 GPSM1Q86YR5 675 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 FUKQ8N0W3 1084 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 SLC25A23Q9BV35 468 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 NUAK2Q9H093 628 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 REEP1Q9H902 201 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 ETNK2Q9NVF9 386 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 A0A087X0B3 334 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 NR2C2P49116 596 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 ITGA1P56199 1179 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 KCTD19Q17RG1 926 aaPredicted RBP18.26■□□□□ 0.51
COL5A3-201ENST00000264828 KLHL24Q6TFL4 600 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 EPB41L1Q9H4G0 881 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 USP17L7P0C7H9 530 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 GRIA3P42263 894 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 RENBPP51606 427 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 UBAP2LQ14157 1087 aaKnown RBP18.25■□□□□ 0.51
COL5A3-201ENST00000264828 OVOS1Q6IE37 1185 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 CREG2Q8IUH2 290 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 MOSPD2Q8NHP6 518 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 SPATA20Q8TB22 786 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 SLC2A14Q8TDB8 520 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 MCRS1Q96EZ8 462 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 TEKT5Q96M29 485 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 YME1L1Q96TA2 773 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 MOXD2PA6NHM9 499 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 LACTBL1A8MY62 500 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 CCR4P51679 360 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 SEC23AQ15436 765 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 PERM1Q5SV97 790 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 TXNRD3Q86VQ6 643 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 DNAJB3Q8WWF6 145 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 PLEKHG4BQ96PX9 1271 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 HMG20AQ9NP66 347 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 KCNK4Q9NYG8 393 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 DDTLA6NHG4 134 aaPredicted RBP18.25■□□□□ 0.51
COL5A3-201ENST00000264828 IL1R1P14778 569 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 CYP4F2P78329 520 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 CYP4F3Q08477 520 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 PFKFB4Q16877 469 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 RNF19AQ9NV58 838 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 VWDEQ8N2E2 1590 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 OPLAHO14841 1288 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 HLA-DQA2P01906 255 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 ANXA6P08133 673 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 IDH2P48735 452 aaKnown RBP18.25■□□□□ 0.51
COL5A3-201ENST00000264828 DET1Q7L5Y6 550 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 TRAPPC12Q8WVT3 735 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 PNMA5Q96PV4 448 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 DUSP9Q99956 384 aaKnown RBP18.25■□□□□ 0.51
COL5A3-201ENST00000264828 PRKD2Q9BZL6 878 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 OPTCQ9UBM4 332 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 F8VP50 259 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 CBWD6Q4V339 395 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 RNF44Q7L0R7 432 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 DEFB128Q7Z7B8 93 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 ETNPPLQ8TBG4 499 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 C1orf50Q9BV19 199 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 TKTL2Q9H0I9 626 aa18.25■□□□□ 0.51
COL5A3-201ENST00000264828 CHURC1-FNTBB4DL54 471 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 RBAK-RBAKDNI3L0D1 243 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 CD3EAPO15446 510 aaKnown RBP18.24■□□□□ 0.51
COL5A3-201ENST00000264828 OR6A2O95222 327 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 GSTT1P30711 240 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 MAPKAPK2P49137 400 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 SYTL5Q8TDW5 730 aaPredicted RBP18.24■□□□□ 0.51
COL5A3-201ENST00000264828 NUDT5Q9UKK9 219 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 TRHDEQ9UKU6 1024 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 PGM3O95394 542 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 KPNA1P52294 538 aaPredicted RBP18.24■□□□□ 0.51
COL5A3-201ENST00000264828 PCDHGA4Q9Y5G9 962 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 RXRGP48443 463 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 TTC7BQ86TV6 843 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 DENND6AQ8IWF6 608 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 MCOLN3Q8TDD5 553 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 ZBTB45Q96K62 511 aaPredicted RBP18.24■□□□□ 0.51
COL5A3-201ENST00000264828 RHBGQ9H310 441 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 EPB41L4BQ9H329 900 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 CATSPERZQ9NTU4 200 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 TAS2R14Q9NYV8 317 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 KLQ9UEF7 1012 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 NDOR1Q9UHB4 597 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 E5RJQ4 531 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 PSMB4P28070 264 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 GRIK4Q16099 956 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 CRY1Q16526 586 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 KYAT3Q6YP21 454 aaKnown RBP18.24■□□□□ 0.51
COL5A3-201ENST00000264828 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.24■□□□□ 0.51
COL5A3-201ENST00000264828 CAMKK1Q8N5S9 505 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 SMARCD1Q96GM5 515 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 MTFR1LQ9H019 292 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 PCDHA11Q9Y5I1 949 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms