RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 DPEP3Q9H4B8 488 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 ANKZF1Q9H8Y5 726 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 CRTAC1Q9NQ79 661 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 WSB2Q9NYS7 404 aaPredicted RBP13.75□□□□□ -0.21
SGCA-201ENST00000262018 WDR35Q9P2L0 1181 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 EIF2B4Q9UI10 523 aaKnown RBP13.75□□□□□ -0.21
SGCA-201ENST00000262018 TMEM59LQ9UK28 342 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 TSPAN16Q9UKR8 245 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 STARD13Q9Y3M8 1113 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 PCDHA3Q9Y5H8 950 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 PIEZO2Q9H5I5 2752 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 PTPN13Q12923 2485 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 ZNF840PA6NDX5 716 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 TMEM191CA6NGB0 347 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 PGRMC1O00264 195 aaKnown RBP13.74□□□□□ -0.21
SGCA-201ENST00000262018 HOXC11O43248 304 aaPredicted RBP13.74□□□□□ -0.21
SGCA-201ENST00000262018 SPOPO43791 374 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 SLC28A2O43868 658 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 SETSIPP0DME0 302 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 MBL2P11226 248 aaPredicted RBP13.74□□□□□ -0.21
SGCA-201ENST00000262018 MAN1A1P33908 653 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 CSNK1EP49674 416 aaKnown RBP13.74□□□□□ -0.21
SGCA-201ENST00000262018 TLE3Q04726 772 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 MDH1BQ5I0G3 518 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 PPP1R26Q5T8A7 1209 aaPredicted RBP13.74□□□□□ -0.21
SGCA-201ENST00000262018 GRAMD4Q6IC98 578 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 DNAJC24Q6P3W2 148 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 ACOT1Q86TX2 421 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 DDX42Q86XP3 938 aaKnown RBP eCLIP13.74□□□□□ -0.21
SGCA-201ENST00000262018 CADM4Q8NFZ8 388 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 ALG3Q92685 438 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 KRT35Q92764 455 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 C18orf8Q96DM3 657 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 TRIM7Q9C029 511 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 FTSJ1Q9UET6 329 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 SNX11Q9Y5W9 270 aa13.74□□□□□ -0.21
SGCA-201ENST00000262018 OLFM2O95897 454 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 GRIK1P39086 918 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 MAGEA11P43364 429 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 PDCLQ13371 301 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 LY6DQ14210 128 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 KIF19Q2TAC6 998 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 GOLGA7BQ2TAP0 167 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 DENND5BQ6ZUT9 1274 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 XYLT1Q86Y38 959 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 CPNE8Q86YQ8 564 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 SPACA3Q8IXA5 215 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 C12orf29Q8N999 325 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 FGF11Q92914 225 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 MYLPFQ96A32 169 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 WBP1Q96G27 269 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 PCED1BQ96HM7 432 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 SPATA17Q96L03 361 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 CPXM1Q96SM3 734 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 GABRG3Q99928 467 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 PARD6BQ9BYG5 372 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 MIS12Q9H081 205 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 IP6K2Q9UHH9 426 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 RAB21Q9UL25 225 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 MGAQ8IWI9 3026 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 E2F8A0AVK6 867 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 TARSL2A2RTX5 802 aaKnown RBP13.73□□□□□ -0.21
SGCA-201ENST00000262018 SIGLEC16A6NMB1 481 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 METTL12A8MUP2 240 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 OAS1P00973 400 aaKnown RBP13.73□□□□□ -0.21
SGCA-201ENST00000262018 ERBB2P04626 1255 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 RHOXF2BP0C7M4 288 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 C6P13671 934 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 IL12RB1P42701 662 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 MARCKSL1P49006 195 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 RHDQ02161 417 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 TARDBPQ13148 414 aaKnown RBP eCLIP13.73□□□□□ -0.21
SGCA-201ENST00000262018 RTP5Q14D33 572 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 TMEM25Q86YD3 366 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 UBA3Q8TBC4 463 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 SNX19Q92543 992 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 OTUB2Q96DC9 234 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 RHOXF2Q9BQY4 288 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 NRSN2Q9GZP1 204 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 DNAJC17Q9NVM6 304 aaKnown RBP13.73□□□□□ -0.21
SGCA-201ENST00000262018 TJP2Q9UDY2 1190 aa13.73□□□□□ -0.21
SGCA-201ENST00000262018 WASH3PC4AMC7 463 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 GJB6O95452 261 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 BDNFP23560 247 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 PPP3CCP48454 512 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 CCT8P50990 548 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 RWDD2BP57060 319 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 RPL7AP62424 266 aaKnown RBP13.72□□□□□ -0.21
SGCA-201ENST00000262018 GLE1Q53GS7 698 aaKnown RBP13.72□□□□□ -0.21
SGCA-201ENST00000262018 CCDC70Q6NSX1 233 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 DCUN1D2Q6PH85 259 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 FBXO38Q6PIJ6 1188 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 VSTM1Q6UX27 236 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 METTL3Q86U44 580 aaKnown RBP13.72□□□□□ -0.21
SGCA-201ENST00000262018 NIPA2Q8N8Q9 360 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 C1orf216Q8TAB5 229 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 FNIP1Q8TF40 1166 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 STK32AQ8WU08 396 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 SLC35F5Q8WV83 523 aa13.72□□□□□ -0.21
SGCA-201ENST00000262018 MCEEQ96PE7 176 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms