RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 SMCO1Q147U7 214 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 NFE2Q16621 373 aaPredicted RBP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 NFIL3Q16649 462 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 UGP2Q16851 508 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 TBRG1Q3YBR2 411 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 KCTD1Q719H9 257 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 EMC1Q8N766 993 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 PRELID2Q8N945 189 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 FAM71DQ8N9W8 422 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 ATG16L2Q8NAA4 619 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 DHX38Q92620 1227 aaKnown RBP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 S100PBPQ96BU1 408 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 TMCO6Q96DC7 493 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 KAZALD1Q96I82 304 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 PRICKLE1Q96MT3 831 aaPredicted RBP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 PHOX2BQ99453 314 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 IDI2Q9BXS1 227 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 VPS33BQ9H267 617 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 XKR8Q9H6D3 395 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 SIAEQ9HAT2 523 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 ITM2CQ9NQX7 267 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 MAN1C1Q9NR34 630 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 CASZ1Q86V15 1759 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ATG7O95352 703 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 SNAP29O95721 258 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 MT-CO1P00395 513 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ERCC2P18074 760 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 MATN1P21941 496 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ARL4AP40617 200 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 NFE2L1Q14494 772 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 USP10Q14694 798 aaKnown RBP10.81□□□□□ -0.68
KPNA3-201ENST00000261667 PTPN20Q4JDL3 420 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 CRTC1Q6UUV9 634 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 VSTM1Q6UX27 236 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 Q6ZNX1 250 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 P2RY8Q86VZ1 359 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 BPHLQ86WA6 291 aaPredicted RBP10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ZNF540Q8NDQ6 660 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 POF1BQ8WVV4 589 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 SNX19Q92543 992 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ACCSQ96QU6 501 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ZNF347Q96SE7 839 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 MNTQ99583 582 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 PCYOX1Q9UHG3 505 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ITGA11Q9UKX5 1188 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 NOX1Q9Y5S8 564 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 GON4LQ3T8J9 2241 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 AQP9O43315 295 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 PSIP1O75475 530 aaKnown RBP10.81□□□□□ -0.68
KPNA3-201ENST00000261667 RFPL2O75678 378 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 SERPINA1P01009 418 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 PRKAR1AP10644 381 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 BMP3P12645 472 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 MAZP56270 477 aaKnown RBP10.81□□□□□ -0.68
KPNA3-201ENST00000261667 FAM98BQ52LJ0 330 aaKnown RBP10.81□□□□□ -0.68
KPNA3-201ENST00000261667 FNBP1LQ5T0N5 605 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 PXDC1Q5TGL8 231 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ZNF517Q6ZMY9 492 aaPredicted RBP10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ATG9AQ7Z3C6 839 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ANKRD13BQ86YJ7 626 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 THUMPD3Q9BV44 507 aaKnown RBP10.81□□□□□ -0.68
KPNA3-201ENST00000261667 SERHLQ9NQF3 203 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 SNX7Q9UNH6 387 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 BCORQ6W2J9 1755 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ABCB11O95342 1321 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 POLRMTO00411 1230 aaKnown RBP10.81□□□□□ -0.68
KPNA3-201ENST00000261667 UBDO15205 165 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 HUS1O60921 280 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ZNF37AP17032 561 aaPredicted RBP10.81□□□□□ -0.68
KPNA3-201ENST00000261667 LIG4P49917 911 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 SCN1BQ07699 218 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 NFIAQ12857 509 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 NFX1Q12986 1120 aaKnown RBP10.81□□□□□ -0.68
KPNA3-201ENST00000261667 CCNG2Q16589 344 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 PLEKHG6Q3KR16 790 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ARSKQ6UWY0 536 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 DPY19L3Q6ZPD9 716 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ASRGL1Q7L266 308 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 DGLUCYQ7Z3D6 616 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 SLC15A4Q8N697 577 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 AGXT2Q9BYV1 514 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 HSD3B7Q9H2F3 369 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 SYNDIG1Q9H7V2 258 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 DNAJC18Q9H819 358 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 ACAD9Q9H845 621 aa10.81□□□□□ -0.68
KPNA3-201ENST00000261667 BCL9LQ86UU0 1499 aa10.8□□□□□ -0.68
KPNA3-201ENST00000261667 ZNF263O14978 683 aa10.8□□□□□ -0.68
KPNA3-201ENST00000261667 CST8O60676 142 aa10.8□□□□□ -0.68
KPNA3-201ENST00000261667 PTPN5P54829 565 aa10.8□□□□□ -0.68
KPNA3-201ENST00000261667 GNA13Q14344 377 aa10.8□□□□□ -0.68
KPNA3-201ENST00000261667 BTBD16Q32M84 506 aa10.8□□□□□ -0.68
KPNA3-201ENST00000261667 AARS2Q5JTZ9 985 aaKnown RBP10.8□□□□□ -0.68
KPNA3-201ENST00000261667 ZC3H7AQ8IWR0 971 aaKnown RBP10.8□□□□□ -0.68
KPNA3-201ENST00000261667 GALNT11Q8NCW6 608 aa10.8□□□□□ -0.68
KPNA3-201ENST00000261667 ETNPPLQ8TBG4 499 aa10.8□□□□□ -0.68
KPNA3-201ENST00000261667 RNFT2Q96EX2 444 aa10.8□□□□□ -0.68
KPNA3-201ENST00000261667 TMEM121Q9BTD3 319 aa10.8□□□□□ -0.68
KPNA3-201ENST00000261667 ADI1Q9BV57 179 aa10.8□□□□□ -0.68
KPNA3-201ENST00000261667 CHST7Q9NS84 486 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms