RNA–Protein interactions for RNA: ENST00000261226.8

TMCC3-201, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC3, Length 5,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-201ENST00000261226 DUX4L3P0CJ86 424 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 DUX4L4P0CJ87 422 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 DUX4L5P0CJ88 424 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 DUX4L6P0CJ89 424 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 DUX4L7P0CJ90 424 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 KRT20P35900 424 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 PTGIRP43119 386 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 OXCT1P55809 520 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 BROXQ5VW32 411 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 MFSD14CQ5VZR4 134 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 CMC1Q7Z7K0 106 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 SPATA6LQ8N4H0 392 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 OR56A4Q8NGH8 313 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 CAPSLQ8WWF8 208 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 RSPH1Q8WYR4 309 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 OMA1Q96E52 524 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 CADM1Q9BY67 442 aaKnown RBP14.39□□□□□ -0.11
TMCC3-201ENST00000261226 TAS2R13Q9NYV9 303 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 DUX4Q9UBX2 424 aa14.39□□□□□ -0.11
TMCC3-201ENST00000261226 SPATA31A5Q5VU36 1347 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 SPATA31A7Q8IWB4 1347 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 GNG14A0A1W2PPG7 69 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 MGAT4DA6NG13 374 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 DPYSL4O14531 572 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 TSPAN8P19075 237 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 SLC11A2P49281 568 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 INAQ16352 499 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 HIST2H2ACQ16777 129 aaPredicted RBP14.38□□□□□ -0.11
TMCC3-201ENST00000261226 PFKFB4Q16877 469 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 HIST2H2AA3Q6FI13 130 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 DDX53Q86TM3 631 aaKnown RBP14.38□□□□□ -0.11
TMCC3-201ENST00000261226 SLC44A1Q8WWI5 657 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 TPD52L3Q96J77 140 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 FAM210AQ96ND0 272 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 ZBED2Q9BTP6 218 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 ARHGEF3Q9NR81 526 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 SNX15Q9NRS6 342 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 GRHL1Q9NZI5 618 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 ZMYM5Q9UJ78 669 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 PRPF19Q9UMS4 504 aaKnown RBP14.38□□□□□ -0.11
TMCC3-201ENST00000261226 PSMD13Q9UNM6 376 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 SLC12A4Q9UP95 1085 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 SEC22BO75396 215 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 FGRP09769 529 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 CCDC166P0CW27 439 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 LBPP18428 481 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 SLC26A2P50443 739 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 FBXO32Q969P5 355 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 PORCNQ9H237 461 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 FAM53CQ9NYF3 392 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 ADAM28Q9UKQ2 775 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 MTF2Q9Y483 593 aaPredicted RBP14.38□□□□□ -0.11
TMCC3-201ENST00000261226 BTN3A1O00481 513 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 VCLP18206 1134 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 MSH3P20585 1137 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 HALP42357 657 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 GPRC5AQ8NFJ5 357 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 PTCD3Q96EY7 689 aaKnown RBP14.38□□□□□ -0.11
TMCC3-201ENST00000261226 SYT15Q9BQS2 421 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 RAD21L1Q9H4I0 556 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 ATP6AP2A0A1C7CYW4 349 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 C5orf60A6NFR6 353 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 ATP6AP2O75787 350 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 LHX1P48742 406 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 TUBP50607 506 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 RENBPP51606 427 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 JAM2P57087 298 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 CDH18Q13634 790 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 C1DQ13901 141 aaKnown RBP14.38□□□□□ -0.11
TMCC3-201ENST00000261226 SFRP1Q8N474 314 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 FAM47BQ8NA70 645 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 CDH19Q9H159 772 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 WDR55Q9H6Y2 383 aaPredicted RBP14.38□□□□□ -0.11
TMCC3-201ENST00000261226 TMA7Q9Y2S6 64 aaKnown RBP14.38□□□□□ -0.11
TMCC3-201ENST00000261226 VPS4BO75351 444 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 CYP1A1P04798 512 aaPredicted RBP14.38□□□□□ -0.11
TMCC3-201ENST00000261226 ATP5F1P24539 256 aaPredicted RBP14.38□□□□□ -0.11
TMCC3-201ENST00000261226 TMEM63BQ5T3F8 832 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 TYW3Q6IPR3 259 aaKnown RBP14.38□□□□□ -0.11
TMCC3-201ENST00000261226 RFWD3Q6PCD5 774 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 PACS1Q6VY07 963 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 ZNF572Q7Z3I7 529 aaPredicted RBP14.38□□□□□ -0.11
TMCC3-201ENST00000261226 UBASH3BQ8TF42 649 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 LGMNQ99538 433 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 NPAS2Q99743 824 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 RNF181Q9P0P0 153 aa14.38□□□□□ -0.11
TMCC3-201ENST00000261226 TMEM191CA6NGB0 347 aa14.37□□□□□ -0.11
TMCC3-201ENST00000261226 TAF4O00268 1085 aa14.37□□□□□ -0.11
TMCC3-201ENST00000261226 PEX11AO75192 247 aa14.37□□□□□ -0.11
TMCC3-201ENST00000261226 ASS1P00966 412 aaKnown RBP14.37□□□□□ -0.11
TMCC3-201ENST00000261226 HNRNPLP14866 589 aaKnown RBP eCLIP14.37□□□□□ -0.11
TMCC3-201ENST00000261226 CYP2B6P20813 491 aa14.37□□□□□ -0.11
TMCC3-201ENST00000261226 HPCAP84074 193 aa14.37□□□□□ -0.11
TMCC3-201ENST00000261226 FNBP1LQ5T0N5 605 aa14.37□□□□□ -0.11
TMCC3-201ENST00000261226 PDZK1Q5T2W1 519 aa14.37□□□□□ -0.11
TMCC3-201ENST00000261226 UTS2BQ765I0 119 aa14.37□□□□□ -0.11
TMCC3-201ENST00000261226 MKL1Q969V6 931 aa14.37□□□□□ -0.11
TMCC3-201ENST00000261226 HGH1Q9BTY7 390 aa14.37□□□□□ -0.11
TMCC3-201ENST00000261226 TMEM131LA2VDJ0 1609 aa14.37□□□□□ -0.11
TMCC3-201ENST00000261226 LOC100506127A0A0U1RQW1 187 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms