RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ZIK1Q3SY52 487 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 ZBED5Q49AG3 693 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 KIAA1755Q5JYT7 1200 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 RC3H1Q5TC82 1133 aaKnown RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 C12orf60Q5U649 245 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 BICRALQ6AI39 1079 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 DSG4Q86SJ6 1040 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 TBC1D21Q8IYX1 336 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 ATG16L2Q8NAA4 619 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 RAB2BQ8WUD1 216 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 GAL3ST3Q96A11 431 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 SGF29Q96ES7 293 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 AK8Q96MA6 479 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 SACM1LQ9NTJ5 587 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 MROH7-TTC4A0A0A0MT08 1334 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 UTYO14607 1347 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 GSTA4O15217 222 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 SHBGP04278 402 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 RBP1P09455 135 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 EIF6P56537 245 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 TRIM32Q13049 653 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 LSM12Q3MHD2 195 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 ESCO2Q56NI9 601 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 FCRLBQ6BAA4 426 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 C10orf107Q8IVU9 208 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 CCDC60Q8IWA6 550 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 MB21D1Q8N884 522 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 OR5T1Q8NG75 326 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 OR8K5Q8NH50 307 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 TMCO6Q96DC7 493 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 MS4A14Q96JA4 679 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 ZCCHC2Q9C0B9 1178 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 GDF3Q9NR23 364 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 GFOD1Q9NXC2 390 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 ZHX2Q9Y6X8 837 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 MEGF6O75095 1541 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 H7C1Q1 480 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 PPP6R2O75170 966 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 TFRCP02786 760 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 ITGB1P05556 798 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 IL7P13232 177 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 AKR1B1P15121 316 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF23P17027 643 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 SLC26A3P40879 764 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 GNA12Q03113 381 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 SF3B4Q15427 424 aaKnown RBP eCLIP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 CA9Q16790 459 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 FAM47CQ5HY64 1035 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 INTS6LQ5JSJ4 861 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 FAM209BQ5JX69 171 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 TAF2Q6P1X5 1199 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 C3orf62Q6ZUJ4 267 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 CYB5R4Q7L1T6 521 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 KDELC2Q7Z4H8 507 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF227Q86WZ6 799 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 CEP97Q8IW35 865 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 SPATA6LQ8N4H0 392 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 HS6ST2Q96MM7 605 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF112Q9UJU3 913 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 FMN2Q9NZ56 1722 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 AGPSO00116 658 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 GNAO1P09471 354 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 CDH2P19022 906 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 MATN1P21941 496 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 MAT2AP31153 395 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 BTDP43251 543 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 ATP12AP54707 1039 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 NME3Q13232 169 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 PPIL2Q13356 520 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 DRICH1Q6PGQ1 229 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 RRM2BQ7LG56 351 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 METTL23Q86XA0 190 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 FMR1NBQ8N0W7 255 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 TTLQ8NG68 377 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 CKAP2Q8WWK9 683 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 SGTBQ96EQ0 304 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 DCUN1D1Q96GG9 259 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 RPRD1AQ96P16 312 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 NCOA5Q9HCD5 579 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 ATP13A1Q9HD20 1204 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 EXOSC4Q9NPD3 245 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF222Q9UK12 451 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 HCN4Q9Y3Q4 1203 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 SF3B1O75533 1304 aaKnown RBP eCLIP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 A0A1B0GTH6 734 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 IL6P05231 212 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 RPL9P32969 192 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 NR4A2P43354 598 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 HSF2Q03933 536 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 KIF19Q2TAC6 998 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 PLET1Q6UQ28 207 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 ABRAXAS1Q6UWZ7 409 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 MCFD2Q8NI22 146 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 RNF25Q96BH1 459 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 NXNL1Q96CM4 212 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 DERAQ9Y315 318 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 ST8SIA5O15466 376 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 SNAP91O60641 907 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 KDM4BO94953 1096 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms