RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 PPME1Q9Y570 386 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 TTC24A2A3L6 582 aaPredicted RBP13.76□□□□□ -0.21
VHL-201ENST00000256474 TPST1O60507 370 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 FKBP6O75344 327 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 VCLP18206 1134 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 XRCC1P18887 633 aaPredicted RBP13.76□□□□□ -0.21
VHL-201ENST00000256474 DGKDQ16760 1214 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 LSM12Q3MHD2 195 aaKnown RBP13.76□□□□□ -0.21
VHL-201ENST00000256474 FBXO48Q5FWF7 155 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 BHLHE22Q8NFJ8 381 aaPredicted RBP13.76□□□□□ -0.21
VHL-201ENST00000256474 CENPKQ9BS16 269 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 CDH19Q9H159 772 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 WDCPQ9H6R7 721 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 XPR1Q9UBH6 696 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 TSR3Q9UJK0 312 aaKnown RBP13.76□□□□□ -0.21
VHL-201ENST00000256474 MYBPHLA2RUH7 354 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 F8W8V4 182 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 DPYSL4O14531 572 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 FAM200BP0CF97 657 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 AOC1P19801 751 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 PIK3R1P27986 724 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 PMLP29590 882 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 PTPN9P43378 593 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 CSHL1Q14406 222 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 GK3PQ14409 553 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 GPRIN1Q7Z2K8 1008 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 PSTKQ8IV42 348 aaKnown RBP13.76□□□□□ -0.21
VHL-201ENST00000256474 WNT8BQ93098 351 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 RTP4Q96DX8 246 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 SNX27Q96L92 541 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 CPNE1Q99829 537 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 C16orf70Q9BSU1 422 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 SMPD1P17405 629 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 PTPN1P18031 435 aaKnown RBP13.75□□□□□ -0.21
VHL-201ENST00000256474 THOP1P52888 689 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 FOLH1Q04609 750 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 NIPAL4Q0D2K0 466 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 PDK3Q15120 406 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 ACAD11Q709F0 780 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 GATA6Q92908 595 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 GRIP2Q9C0E4 1043 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 VCX3BQ9H321 246 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 CCDC167Q9P0B6 97 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 PDP2Q9P2J9 529 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 OR12D3Q9UGF7 316 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 CLGNO14967 610 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 TREHO43280 583 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 SNUPNO95149 360 aaKnown RBP13.75□□□□□ -0.21
VHL-201ENST00000256474 CNTFP26441 200 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 ARL1P40616 181 aaPredicted RBP13.75□□□□□ -0.21
VHL-201ENST00000256474 CHRNA4P43681 627 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 RALGDSQ12967 914 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 PITRM1Q5JRX3 1037 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 SH2D4BQ5SQS7 431 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 C6orf52Q5T4I8 152 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 FBXW8Q8N3Y1 598 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 GPRC5AQ8NFJ5 357 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 RBBP8Q99708 897 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 ZDHHC2Q9UIJ5 367 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 PCDHGB4Q9UN71 923 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 PCDHGB5Q9Y5G0 923 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 A0A0G2JLL6 359 aaPredicted RBP13.75□□□□□ -0.21
VHL-201ENST00000256474 NPR3P17342 541 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 ADRA1BP35368 520 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 ALDH1A3P47895 512 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 TUBB3Q13509 450 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 ITGA7Q13683 1181 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 PKDCCQ504Y2 493 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 GRTP1Q5TC63 336 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 PDZD4Q76G19 769 aaPredicted RBP13.75□□□□□ -0.21
VHL-201ENST00000256474 PRRT2Q7Z6L0 340 aaPredicted RBP13.75□□□□□ -0.21
VHL-201ENST00000256474 NXNL1Q96CM4 212 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 PHF12Q96QT6 1004 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 PRPF18Q99633 342 aaKnown RBP13.75□□□□□ -0.21
VHL-201ENST00000256474 FICDQ9BVA6 458 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 FSD1LQ9BXM9 530 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 SLC2A6Q9UGQ3 507 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 TLL2Q9Y6L7 1015 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 WDR81Q562E7 1941 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 ARID2Q68CP9 1835 aa13.75□□□□□ -0.21
VHL-201ENST00000256474 AHCYL1O43865 530 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 GPC4O75487 556 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 SETSIPP0DME0 302 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 LILRA4P59901 499 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 CNPY1Q3B7I2 92 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 GK5Q6ZS86 529 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 TTC39CQ8N584 583 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 OR6P1Q8NGX9 317 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 ZNF560Q96MR9 790 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 GAD1Q99259 594 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 NOS2P35228 1153 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 ACADSBP45954 432 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 MAXP61244 160 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 PRAMEP78395 509 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 CYLC2Q14093 348 aaPredicted RBP13.74□□□□□ -0.21
VHL-201ENST00000256474 ESRP1Q6NXG1 681 aaKnown RBP13.74□□□□□ -0.21
VHL-201ENST00000256474 TAPT1Q6NXT6 567 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 DSELQ8IZU8 1212 aa13.74□□□□□ -0.21
VHL-201ENST00000256474 DIS3LQ8TF46 1054 aaKnown RBP13.74□□□□□ -0.21
VHL-201ENST00000256474 PCDHAC1Q9H158 963 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms