RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 IFI35P80217 286 aaPredicted RBP19.26■□□□□ 0.67
PTPRE-201ENST00000254667 FAM45BPQ6NSW5 357 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 HJURPQ8NCD3 748 aaPredicted RBP19.26■□□□□ 0.67
PTPRE-201ENST00000254667 FAM45AQ8TCE6 357 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 RSPH1Q8WYR4 309 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 NUDT5Q9UKK9 219 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 ADH1AP07327 375 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 CCNB1P14635 433 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 HDCP19113 662 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 VAC14Q08AM6 782 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 CRY1Q16526 586 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 ATAD3BQ5T9A4 648 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 ZBTB49Q6ZSB9 765 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 PALB2Q86YC2 1186 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 BTBD10Q9BSF8 475 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 UNKQ9C0B0 810 aaKnown RBP19.26■□□□□ 0.67
PTPRE-201ENST00000254667 TRPC4Q9UBN4 977 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 ENOPH1Q9UHY7 261 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 MAPRE3Q9UPY8 281 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 CCDC154A6NI56 674 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 SPTLC1O15269 473 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 MRPS5P82675 430 aaKnown RBP19.26■□□□□ 0.67
PTPRE-201ENST00000254667 GPR141Q7Z602 305 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 ANKRD27Q96NW4 1050 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 LTA4HP09960 611 aaKnown RBP19.25■□□□□ 0.67
PTPRE-201ENST00000254667 CD52P31358 61 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 TBCELQ5QJ74 424 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 TREML2Q5T2D2 321 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 FIBCD1Q8N539 461 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 QRFPRQ96P65 431 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 DUSP16Q9BY84 665 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 HPS4Q9NQG7 708 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 SAR1AQ9NR31 198 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 FAM105AQ9NUU6 356 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 KCNK4Q9NYG8 393 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 PPP1R15BQ5SWA1 713 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 MSL3Q8N5Y2 521 aaKnown RBP19.25■□□□□ 0.67
PTPRE-201ENST00000254667 OR52K1Q8NGK4 314 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 LHX5Q9H2C1 402 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 A0A088AWK7 358 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 QSOX1O00391 747 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 MRASO14807 208 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 USP12O75317 370 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 SNUPNO95149 360 aaKnown RBP19.25■□□□□ 0.67
PTPRE-201ENST00000254667 ZNF10P21506 573 aaPredicted RBP19.25■□□□□ 0.67
PTPRE-201ENST00000254667 BRMS1LQ5PSV4 323 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 LYPLAL1Q5VWZ2 237 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 CES5AQ6NT32 575 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 AFTPHQ6ULP2 937 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 FAM126BQ8IXS8 530 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 GPR20Q99678 358 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 HGH1Q9BTY7 390 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.25■□□□□ 0.67
PTPRE-201ENST00000254667 GNPTGQ9UJJ9 305 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 B4GALT4O60513 344 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 GUCY1B2O75343 617 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 KHDRBS2Q5VWX1 349 aaKnown RBP19.25■□□□□ 0.67
PTPRE-201ENST00000254667 EEF1DP3Q658K8 133 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 RIPOR1Q6ZS17 1223 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 CHMP1BQ7LBR1 199 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 REM2Q8IYK8 340 aaPredicted RBP19.25■□□□□ 0.67
PTPRE-201ENST00000254667 C4orf32Q8N8J7 132 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 ZDHHC6Q9H6R6 413 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 ATP13A3Q9H7F0 1226 aa19.25■□□□□ 0.67
PTPRE-201ENST00000254667 RPL22P35268 128 aaKnown RBP19.24■□□□□ 0.67
PTPRE-201ENST00000254667 CD86P42081 329 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 GUCA1AP43080 201 aaPredicted RBP19.24■□□□□ 0.67
PTPRE-201ENST00000254667 SLC30A9Q6PML9 568 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 TPGS1Q6ZTW0 290 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 DHFR2Q86XF0 187 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 ATL1Q8WXF7 558 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 CERS2Q96G23 380 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 BDH2Q9BUT1 245 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 hCG_1818297A0A087WSY0 165 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 FAM220BPB1ANY3 271 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 B4GALT5O43286 388 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 ZSCAN5DPP0CG00 497 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 HPCAL1P37235 193 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 GPR15P49685 360 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 RPL14P50914 215 aaKnown RBP19.24■□□□□ 0.67
PTPRE-201ENST00000254667 CDK20Q8IZL9 346 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 ATG16L2Q8NAA4 619 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 SORCS3Q9UPU3 1222 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 A0A0B4J269 797 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 ATP6V1B1P15313 513 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 ALDH9A1P49189 494 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 FRG1Q14331 258 aaKnown RBP19.24■□□□□ 0.67
PTPRE-201ENST00000254667 ZCWPW2Q504Y3 356 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 STXBP5Q5T5C0 1151 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 CYP4Z2PQ8N1L4 340 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 TMEM132CQ8N3T6 1108 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 ACMSDQ8TDX5 336 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 UBE2E3Q969T4 207 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 CENPTQ96BT3 561 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 ACP6Q9NPH0 428 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 ARL15Q9NXU5 204 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 USE1Q9NZ43 259 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 TDRKHQ9Y2W6 561 aaKnown RBP19.24■□□□□ 0.67
PTPRE-201ENST00000254667 EPHB6O15197 1021 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 MT-CO1P00395 513 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms