RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 GALNT3Q14435 633 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 CNPY4Q8N129 248 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 ASB8Q9H765 288 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 LMTK2Q8IWU2 1503 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 BCL9O00512 1426 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 MTA2O94776 668 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 GOT1P17174 413 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 NPR3P17342 541 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 VSIG10LQ86VR7 867 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 DCUN1D5Q9BTE7 237 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 TSC22D4Q9Y3Q8 395 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 UMODL1Q5DID0 1318 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 FAM220BPB1ANY3 271 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 CLPTM1O96005 669 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 HDCP19113 662 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 NT5DC1Q5TFE4 455 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 PIGZQ86VD9 579 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 SEPT3Q9UH03 358 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 TREML2Q5T2D2 321 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 MRPL9Q9BYD2 267 aaKnown RBP18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 CDT1Q9H211 546 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 SIK3Q9Y2K2 1263 aa18.97■□□□□ 0.63
SMARCC1-201ENST00000254480 FAM47E-STBD1D6RA91 191 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 CCDC166P0CW27 439 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 UNC5AQ6ZN44 842 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 RIOX2Q8IUF8 465 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 NAT16Q8N8M0 369 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 FBXO30Q8TB52 745 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 USP7Q93009 1102 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 VCPIP1Q96JH7 1222 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 SNTNA6NMZ2 147 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 CDC25CP30307 473 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 RPL7AP62424 266 aaKnown RBP18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 KIAA1324Q6UXG2 1013 aaKnown RBP18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 MACC1Q6ZN28 852 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 CYP4X1Q8N118 509 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 RRN3Q9NYV6 651 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 AHSPQ9NZD4 102 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 PEX11AO75192 247 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 SASH3O75995 380 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 PTPN3P26045 913 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 NOS2P35228 1153 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 HIRAP54198 1017 aaPredicted RBP18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 PYDC1Q8WXC3 89 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 MIR1-1HGQ9H1L0 117 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 ATP12AP54707 1039 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 MAPK11Q15759 364 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 CNSTQ6PJW8 725 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 VGLL2Q8N8G2 317 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 PRKD2Q9BZL6 878 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 BTRCQ9Y297 605 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 COL5A2P05997 1499 aaPredicted RBP18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 AVILO75366 819 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 CYP2A6P11509 494 aaPredicted RBP18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 COX7A2P14406 83 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 DDI2Q5TDH0 399 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 NEPROQ6NW34 567 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 SAPCD2Q86UD0 394 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 LGMNQ99538 433 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 GOLGA2P5Q9HBQ8 144 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 ZFP14Q9HCL3 533 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 KLHL28Q9NXS3 571 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 ZNHIT2Q9UHR6 403 aa18.96■□□□□ 0.63
SMARCC1-201ENST00000254480 PIPSLA2A3N6 862 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 ZNF862O60290 1169 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 CTSEP14091 401 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 MRPS6P82932 125 aaKnown RBP18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 TBX2Q13207 712 aaPredicted RBP18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 NRF1Q16656 503 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 HLA-DQA1Q5Y7H0 255 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 GPR142Q7Z601 462 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 NT5DC4Q86YG4 428 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 TMEM161BQ8NDZ6 487 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 HIC2Q96JB3 615 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 BTBD10Q9BSF8 475 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 KCNMB3Q9NPA1 279 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 SERPINA4P29622 427 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 AMPD2Q01433 879 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 RRP1BQ14684 758 aaKnown RBP18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 KPNB1Q14974 876 aaKnown RBP18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 ECM1Q16610 540 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 NOL9Q5SY16 702 aaKnown RBP18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 ATAD3BQ5T9A4 648 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 WDR36Q8NI36 951 aaKnown RBP18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 TMPRSS4Q9NRS4 437 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 NCKAP1Q9Y2A7 1128 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 CTNNB1P35222 781 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 EIF2B5Q13144 721 aaKnown RBP18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 DDHD1Q8NEL9 900 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 UXTQ9UBK9 157 aaPredicted RBP18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 GPSM3Q9Y4H4 160 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 COPG1Q9Y678 874 aaKnown RBP18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 NRCAMQ92823 1304 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 FAM237BA0A1B0GVD1 139 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 PDE2AO00408 941 aaPredicted RBP18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 SLC45A4Q5BKX6 768 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 USP45Q70EL2 814 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 OR6Y1Q8NGX8 325 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 C6orf62Q9GZU0 229 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms