RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 PSMG1O95456 288 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 IGLV3-25P01717 112 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 HARS2P49590 506 aaKnown RBP19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 IDH3AP50213 366 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 ZNF157P51786 506 aaPredicted RBP19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 MPP3Q13368 585 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 NAA25Q14CX7 972 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 VWA5B1Q5TIE3 1220 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 URGCPQ8TCY9 931 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 PPP4R1Q8TF05 950 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 STN1Q9H668 368 aaKnown RBP19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 GEMIN8Q9NWZ8 242 aaKnown RBP19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 TTC3P53804 2025 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 MAGEB16A2A368 324 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 F8W810 466 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 G3V2L1 256 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 CYP11A1P05108 521 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 ITGB1P05556 798 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 PGFP49763 221 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 THOC5Q13769 683 aaKnown RBP19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 NAPRTQ6XQN6 538 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 ARHGAP24Q8N264 748 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 SPATA22Q8NHS9 363 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 NRG4Q8WWG1 115 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 OSBPL2Q9H1P3 480 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 SORCS3Q9UPU3 1222 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 APOBEC2Q9Y235 224 aaKnown RBP19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 MRPL42Q9Y6G3 142 aaKnown RBP19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 MYLKQ15746 1914 aa19.91■□□□□ 0.78
CDC42EP1-201ENST00000249014 DFFAO00273 331 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 TBX10O75333 385 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 C2P06681 752 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 ALOX15P16050 662 aaPredicted RBP19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 CDH17Q12864 832 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 METTL23Q86XA0 190 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 ARHGAP12Q8IWW6 846 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 VPS39Q96JC1 886 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 ARHGEF38Q9NXL2 777 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 STOML1Q9UBI4 398 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 FNDC1Q4ZHG4 1894 aaPredicted RBP19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 MANSC4A6NHS7 340 aaPredicted RBP19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 MEI4A8MW99 385 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 CACNG3O60359 315 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 ZNF623O75123 536 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 SIN3BO75182 1162 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 TM7SF2O76062 418 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 MT-CYBP00156 380 aaPredicted RBP19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 MPOP05164 745 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 CPOXP36551 454 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 THPOP40225 353 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 CDK7P50613 346 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 PGGT1BP53609 377 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 ARTNQ5T4W7 220 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 NAPEPLDQ6IQ20 393 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 SCUBE1Q8IWY4 988 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 SCML4Q8N228 414 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 DTX3LQ8TDB6 740 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 TSGA13Q96PP4 275 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 THTPAQ9BU02 230 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 DNAJC28Q9NX36 388 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 BRCA2P51587 3418 aa19.9■□□□□ 0.78
CDC42EP1-201ENST00000249014 NYNRINQ9P2P1 1898 aaKnown RBP19.89■□□□□ 0.77
CDC42EP1-201ENST00000249014 M0QZQ0 153 aa19.89■□□□□ 0.77
CDC42EP1-201ENST00000249014 IRAK2O43187 625 aa19.89■□□□□ 0.77
CDC42EP1-201ENST00000249014 CYBAP13498 195 aa19.89■□□□□ 0.77
CDC42EP1-201ENST00000249014 ABL2P42684 1182 aa19.89■□□□□ 0.77
CDC42EP1-201ENST00000249014 PRPSAP1Q14558 356 aa19.89■□□□□ 0.77
CDC42EP1-201ENST00000249014 CCDC6Q16204 474 aa19.89■□□□□ 0.77
CDC42EP1-201ENST00000249014 IFNL1Q8IU54 200 aa19.89■□□□□ 0.77
CDC42EP1-201ENST00000249014 KLHDC8BQ8IXV7 354 aa19.89■□□□□ 0.77
CDC42EP1-201ENST00000249014 ULK2Q8IYT8 1036 aa19.89■□□□□ 0.77
CDC42EP1-201ENST00000249014 C1orf21Q9H246 121 aa19.89■□□□□ 0.77
CDC42EP1-201ENST00000249014 SFMBT1Q9UHJ3 866 aa19.89■□□□□ 0.77
CDC42EP1-201ENST00000249014 INPP5FQ9Y2H2 1132 aa19.89■□□□□ 0.77
CDC42EP1-201ENST00000249014 PCDHB12Q9Y5F1 795 aa19.89■□□□□ 0.77
CDC42EP1-201ENST00000249014 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 MSI1O43347 362 aaKnown RBP19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 TIMM44O43615 452 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 YY1P25490 414 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 GCKP35557 465 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 CSE1LP55060 971 aaKnown RBP19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 USP4Q13107 963 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 GRM3Q14832 879 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 TRIM68Q6AZZ1 485 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 ZNF781Q8N8C0 355 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 RSPH1Q8WYR4 309 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 KIFC1Q9BW19 673 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 NDFIP2Q9NV92 336 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 NMRK1Q9NWW6 199 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 SLC7A8Q9UHI5 535 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 A0A0U1RQF3 1178 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 CSRP3P50461 194 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 MXRA7P84157 204 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 PPP2R5DQ14738 602 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 DNAL1Q4LDG9 190 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 SNX30Q5VWJ9 437 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 OVOS1Q6IE37 1185 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 POU5F2Q8N7G0 328 aa19.88■□□□□ 0.77
CDC42EP1-201ENST00000249014 CFAP61Q8NHU2 1237 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms