RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 TRIM33Q9UPN9 1127 aa15.42■□□□□ 0.06
DDX49-201ENST00000247003 PCDHB7Q9Y5E2 793 aa15.42■□□□□ 0.06
DDX49-201ENST00000247003 HS3ST4Q9Y661 456 aa15.42■□□□□ 0.06
DDX49-201ENST00000247003 ZCWPW2A0A1B0GU75 182 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 MAFKO60675 156 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 GNRH1P01148 92 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 MPOP05164 745 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 CPB1P15086 417 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 SELPP16109 830 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 SERPINB3P29508 390 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 TBX4P57082 545 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 OCRLQ01968 901 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 CDK18Q07002 472 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 MPP3Q13368 585 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 BFSP2Q13515 415 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 DEFB115Q30KQ5 88 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 HSP90AA5PQ58FG0 334 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 PDPK2PQ6A1A2 396 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 ARHGAP36Q6ZRI8 547 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 OTOP3Q7RTS5 596 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 ARID3BQ8IVW6 561 aaPredicted RBP15.41■□□□□ 0.06
DDX49-201ENST00000247003 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.41■□□□□ 0.06
DDX49-201ENST00000247003 ATP6V0D2Q8N8Y2 350 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 SLC43A3Q8NBI5 491 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 PPHLN1Q8NEY8 458 aaKnown RBP15.41■□□□□ 0.06
DDX49-201ENST00000247003 IPMKQ8NFU5 416 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 MAGEC3Q8TD91 643 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 DPF3Q92784 378 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 MFSD3Q96ES6 412 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 C1orf74Q96LT6 269 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 PGLYRP2Q96PD5 576 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 TMEM237Q96Q45 408 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 IL12RB2Q99665 862 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 SLC39A8Q9C0K1 460 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 GLOD4Q9HC38 313 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 SNX15Q9NRS6 342 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 LRFN2Q9ULH4 789 aa15.41■□□□□ 0.06
DDX49-201ENST00000247003 KCNU1A8MYU2 1149 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 ARVCFO00192 962 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 CACNG3O60359 315 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 PLIN3O60664 434 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 RTN3O95197 1032 aaPredicted RBP15.4■□□□□ 0.06
DDX49-201ENST00000247003 CBX6O95503 412 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 INHAP05111 366 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 ATP5BP06576 529 aaKnown RBP15.4■□□□□ 0.06
DDX49-201ENST00000247003 GRK4P32298 578 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 HADHAP40939 763 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 PSEN1P49768 467 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 TEDDM1Q5T9Z0 273 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 FAM171A1Q5VUB5 890 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 SDHAF4Q5VUM1 108 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 WDR75Q8IWA0 830 aaKnown RBP15.4■□□□□ 0.06
DDX49-201ENST00000247003 DCLK2Q8N568 766 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 CNTD1Q8N815 330 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 PPP4R1Q8TF05 950 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 SKA1Q96BD8 255 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 ATXN7L3BQ96GX2 97 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 CAPNS2Q96L46 248 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 TSNARE1Q96NA8 513 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 CHRAC1Q9NRG0 131 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 LNPEPQ9UIQ6 1025 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 SNNO75324 88 aaPredicted RBP15.4■□□□□ 0.06
DDX49-201ENST00000247003 TOP3BO95985 862 aaKnown RBP15.4■□□□□ 0.06
DDX49-201ENST00000247003 TPH1P17752 444 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 PAMP19021 973 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 YWHAQP27348 245 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 PCID2Q5JVF3 399 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 C16orf46Q6P387 395 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 KLHDC8BQ8IXV7 354 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 SLAIN1Q8ND83 568 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 FBXO32Q969P5 355 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 ISL2Q96A47 359 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 FICDQ9BVA6 458 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 FAM96AQ9H5X1 160 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 KCNK13Q9HB14 408 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 ENTPD7Q9NQZ7 604 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 TLR8Q9NR97 1041 aaKnown RBP15.4■□□□□ 0.06
DDX49-201ENST00000247003 IARS2Q9NSE4 1012 aaKnown RBP15.4■□□□□ 0.06
DDX49-201ENST00000247003 GMIPQ9P107 970 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 MID2Q9UJV3 735 aa15.4■□□□□ 0.06
DDX49-201ENST00000247003 WASH4PA8MWX3 477 aa15.39■□□□□ 0.05
DDX49-201ENST00000247003 GRK2P25098 689 aa15.39■□□□□ 0.05
DDX49-201ENST00000247003 PTPN4P29074 926 aa15.39■□□□□ 0.05
DDX49-201ENST00000247003 GPR15P49685 360 aa15.39■□□□□ 0.05
DDX49-201ENST00000247003 PGFP49763 221 aa15.39■□□□□ 0.05
DDX49-201ENST00000247003 CDK7P50613 346 aa15.39■□□□□ 0.05
DDX49-201ENST00000247003 NDST2P52849 883 aa15.39■□□□□ 0.05
DDX49-201ENST00000247003 MLLT6P55198 1093 aaPredicted RBP15.39■□□□□ 0.05
DDX49-201ENST00000247003 ARPP19P56211 112 aa15.39■□□□□ 0.05
DDX49-201ENST00000247003 RPL10AP62906 217 aaKnown RBP15.39■□□□□ 0.05
DDX49-201ENST00000247003 ELAVL2Q12926 359 aaKnown RBP15.39■□□□□ 0.05
DDX49-201ENST00000247003 UGP2Q16851 508 aa15.39■□□□□ 0.05
DDX49-201ENST00000247003 ICE2Q659A1 982 aa15.39■□□□□ 0.05
DDX49-201ENST00000247003 FSTL4Q6MZW2 842 aa15.39■□□□□ 0.05
DDX49-201ENST00000247003 CCDC117Q8IWD4 279 aaPredicted RBP15.39■□□□□ 0.05
DDX49-201ENST00000247003 SPATA22Q8NHS9 363 aa15.39■□□□□ 0.05
DDX49-201ENST00000247003 ZSCAN18Q8TBC5 510 aaPredicted RBP15.39■□□□□ 0.05
DDX49-201ENST00000247003 SPPL2BQ8TCT7 592 aa15.39■□□□□ 0.05
DDX49-201ENST00000247003 NSMCE1Q8WV22 266 aa15.39■□□□□ 0.05
DDX49-201ENST00000247003 PTCD2Q8WV60 388 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms