RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 MAGEB16A2A368 324 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 CA12O43570 354 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 PROCP04070 461 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 FGF3P11487 239 aaPredicted RBP22.35■■□□□ 1.17
RNF39-201ENST00000244360 HOXC13P31276 330 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 FLT3LGP49771 235 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 TRIM32Q13049 653 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 KCNA10Q16322 511 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 TRIM71Q2Q1W2 868 aaKnown RBP22.35■■□□□ 1.17
RNF39-201ENST00000244360 TRMT5Q32P41 509 aaKnown RBP22.35■■□□□ 1.17
RNF39-201ENST00000244360 C16orf46Q6P387 395 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 WDR60Q8WVS4 1066 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 ARHGEF37A1IGU5 675 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 ARHGAP42A6NI28 874 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 ENO1P06733 434 aaKnown RBP22.35■■□□□ 1.17
RNF39-201ENST00000244360 CST5P28325 142 aaPredicted RBP22.35■■□□□ 1.17
RNF39-201ENST00000244360 HTR7P34969 479 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 LIMK2P53671 638 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 AQP5P55064 265 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 BRMS1LQ5PSV4 323 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 THEM5Q8N1Q8 247 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 DNAAF3Q8N9W5 541 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 HASPINQ8TF76 798 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 FAM136AQ96C01 138 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 PGLYRP2Q96PD5 576 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 HAPLN3Q96S86 360 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 VCXQ9H320 206 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 FAM96AQ9H5X1 160 aa22.35■■□□□ 1.17
RNF39-201ENST00000244360 TBX10O75333 385 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 TM7SF2O76062 418 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 TSPY1Q01534 308 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 CACNB2Q08289 660 aaPredicted RBP22.34■■□□□ 1.17
RNF39-201ENST00000244360 PCLAFQ15004 111 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 ARTNQ5T4W7 220 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 MANEALQ5VSG8 457 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 SCAMP5Q8TAC9 235 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 RNF34Q969K3 372 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 FAM161BQ96MY7 647 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 CCDC106Q9BWC9 280 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 IL22Q9GZX6 179 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 DNAJB4Q9UDY4 337 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 INPP5FQ9Y2H2 1132 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 AP3B1O00203 1094 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 TNFRSF10BO14763 440 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 SKAP2O75563 359 aaPredicted RBP22.34■■□□□ 1.17
RNF39-201ENST00000244360 JCHAINP01591 159 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 ITGB1P05556 798 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 SPRP35270 261 aaPredicted RBP22.34■■□□□ 1.17
RNF39-201ENST00000244360 THOC5Q13769 683 aaKnown RBP22.34■■□□□ 1.17
RNF39-201ENST00000244360 TEDDM1Q5T9Z0 273 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 ZCCHC23Q6ZST2 131 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 TREML1Q86YW5 311 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 WDR75Q8IWA0 830 aaKnown RBP22.34■■□□□ 1.17
RNF39-201ENST00000244360 SCUBE1Q8IWY4 988 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 SCG3Q8WXD2 468 aaKnown RBP22.34■■□□□ 1.17
RNF39-201ENST00000244360 CELF6Q96J87 481 aaKnown RBP22.34■■□□□ 1.17
RNF39-201ENST00000244360 MCMBPQ9BTE3 642 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 SMOC2Q9H3U7 446 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 SNX15Q9NRS6 342 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 SOX13Q9UN79 622 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 PLA2G4CQ9UP65 541 aa22.34■■□□□ 1.17
RNF39-201ENST00000244360 PSMD3O43242 534 aa22.33■■□□□ 1.17
RNF39-201ENST00000244360 MAP3K7O43318 606 aa22.33■■□□□ 1.17
RNF39-201ENST00000244360 DNAJB2P25686 324 aa22.33■■□□□ 1.17
RNF39-201ENST00000244360 TYK2P29597 1187 aa22.33■■□□□ 1.17
RNF39-201ENST00000244360 SERPINB8P50452 374 aa22.33■■□□□ 1.17
RNF39-201ENST00000244360 RPL10AP62906 217 aaKnown RBP22.33■■□□□ 1.17
RNF39-201ENST00000244360 CERCAMQ5T4B2 595 aa22.33■■□□□ 1.17
RNF39-201ENST00000244360 ARHGAP12Q8IWW6 846 aa22.33■■□□□ 1.17
RNF39-201ENST00000244360 DCLK2Q8N568 766 aa22.33■■□□□ 1.17
RNF39-201ENST00000244360 CNTD1Q8N815 330 aa22.33■■□□□ 1.17
RNF39-201ENST00000244360 RBM15BQ8NDT2 890 aaKnown RBP22.33■■□□□ 1.17
RNF39-201ENST00000244360 PPP1R14CQ8TAE6 165 aa22.33■■□□□ 1.17
RNF39-201ENST00000244360 NRG4Q8WWG1 115 aa22.33■■□□□ 1.17
RNF39-201ENST00000244360 ABCC13Q9NSE7 274 aa22.33■■□□□ 1.17
RNF39-201ENST00000244360 PDHA1P08559 390 aa22.33■■□□□ 1.16
RNF39-201ENST00000244360 LINGO3P0C6S8 592 aa22.33■■□□□ 1.16
RNF39-201ENST00000244360 CCNCP24863 283 aa22.33■■□□□ 1.16
RNF39-201ENST00000244360 TM4SF4P48230 202 aa22.33■■□□□ 1.16
RNF39-201ENST00000244360 SLC5A3P53794 718 aa22.33■■□□□ 1.16
RNF39-201ENST00000244360 IRX4P78413 519 aa22.33■■□□□ 1.16
RNF39-201ENST00000244360 IRX1P78414 480 aaPredicted RBP22.33■■□□□ 1.16
RNF39-201ENST00000244360 PPM1JQ5JR12 505 aa22.33■■□□□ 1.16
RNF39-201ENST00000244360 NAPEPLDQ6IQ20 393 aa22.33■■□□□ 1.16
RNF39-201ENST00000244360 PCDHB8Q9UN66 801 aa22.33■■□□□ 1.16
RNF39-201ENST00000244360 SQORQ9Y6N5 450 aa22.33■■□□□ 1.16
RNF39-201ENST00000244360 SERPINE1P05121 402 aa22.32■■□□□ 1.16
RNF39-201ENST00000244360 PRPSAP1Q14558 356 aa22.32■■□□□ 1.16
RNF39-201ENST00000244360 STRA8Q7Z7C7 330 aa22.32■■□□□ 1.16
RNF39-201ENST00000244360 RILPQ96NA2 401 aa22.32■■□□□ 1.16
RNF39-201ENST00000244360 FGF10O15520 208 aaPredicted RBP22.31■■□□□ 1.16
RNF39-201ENST00000244360 AOC1P19801 751 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 CPA2P48052 419 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 CSE1LP55060 971 aaKnown RBP22.31■■□□□ 1.16
RNF39-201ENST00000244360 CDH17Q12864 832 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 SMAD1Q15797 465 aaKnown RBP22.31■■□□□ 1.16
RNF39-201ENST00000244360 MFSD3Q96ES6 412 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 ZNF778Q96MU6 729 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 AGAP2Q99490 1192 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 GPAMQ9HCL2 828 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms