RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 KCNE4Q8WWG9 221 aa14.22□□□□□ -0.13
DDX39A-201ENST00000242776 RFFLQ8WZ73 363 aa14.22□□□□□ -0.13
DDX39A-201ENST00000242776 TFAP2BQ92481 460 aa14.22□□□□□ -0.13
DDX39A-201ENST00000242776 FCRL2Q96LA5 508 aaPredicted RBP14.22□□□□□ -0.13
DDX39A-201ENST00000242776 DDX50Q9BQ39 737 aaKnown RBP14.22□□□□□ -0.13
DDX39A-201ENST00000242776 RBSNQ9H1K0 784 aa14.22□□□□□ -0.13
DDX39A-201ENST00000242776 FZD3Q9NPG1 666 aa14.22□□□□□ -0.13
DDX39A-201ENST00000242776 SARDHQ9UL12 918 aa14.22□□□□□ -0.13
DDX39A-201ENST00000242776 M0QYV0 167 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 O00370 1275 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 SLC31A1O15431 190 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 LATO43561 262 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 CSO75390 466 aaKnown RBP14.21□□□□□ -0.13
DDX39A-201ENST00000242776 SETSIPP0DME0 302 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 VDRP11473 427 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 PRKCSHP14314 528 aaPredicted RBP14.21□□□□□ -0.13
DDX39A-201ENST00000242776 PDGFRAP16234 1089 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 GTF2H1P32780 548 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 E2F1Q01094 437 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 RHDQ02161 417 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 MAN2A1Q16706 1144 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 KIF26BQ2KJY2 2108 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 ZNF542PQ5EBM4 170 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 KIAA1614Q5VZ46 1190 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 CHSY1Q86X52 802 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 ZNF557Q8N988 423 aaPredicted RBP14.21□□□□□ -0.13
DDX39A-201ENST00000242776 KCTD13Q8WZ19 329 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 KLHDC7BQ96G42 594 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 CLMPQ9H6B4 373 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 NAALADL1Q9UQQ1 740 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.21□□□□□ -0.13
DDX39A-201ENST00000242776 NAV2Q8IVL1 2488 aa14.21□□□□□ -0.13
DDX39A-201ENST00000242776 ITIH6Q6UXX5 1313 aa14.21□□□□□ -0.14
DDX39A-201ENST00000242776 A0A1B0GVM2 712 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 GOLGA6L3A6NEY3 463 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 SLC28A2O43868 658 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 OPA1O60313 960 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 DGKAP23743 735 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 BRD2P25440 801 aaKnown RBP14.2□□□□□ -0.14
DDX39A-201ENST00000242776 NNMTP40261 264 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 CNTN1Q12860 1018 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 ZNF211Q13398 564 aaPredicted RBP14.2□□□□□ -0.14
DDX39A-201ENST00000242776 FILIP1LQ4L180 1135 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 C3orf38Q5JPI3 329 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 FOXR1Q6PIV2 292 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 IRF2BP1Q8IU81 584 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 TRIM59Q8IWR1 403 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 DQX1Q8TE96 717 aaKnown RBP14.2□□□□□ -0.14
DDX39A-201ENST00000242776 FAM149B1Q96BN6 582 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 VCPIP1Q96JH7 1222 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 ZNF578Q96N58 590 aaPredicted RBP14.2□□□□□ -0.14
DDX39A-201ENST00000242776 TUBGCP2Q9BSJ2 902 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 CALN1Q9BXU9 219 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 HSD3B7Q9H2F3 369 aa14.2□□□□□ -0.14
DDX39A-201ENST00000242776 LIMA1Q9UHB6 759 aaKnown RBP14.2□□□□□ -0.14
DDX39A-201ENST00000242776 CAPN8A6NHC0 703 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 C10orf142B7Z368 130 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 PES1O00541 588 aaKnown RBP14.19□□□□□ -0.14
DDX39A-201ENST00000242776 ARHGAP6O43182 974 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 MAGEC1O60732 1142 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 SERPINC1P01008 464 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 THEGLP0DJG4 465 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 TACR2P21452 398 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 ELAVL3Q14576 367 aaKnown RBP14.19□□□□□ -0.14
DDX39A-201ENST00000242776 ARID5BQ14865 1188 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 KRT31Q15323 416 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 TMEM270Q6UE05 265 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 TAC4Q86UU9 113 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 OR8D1Q8WZ84 308 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 HIC2Q96JB3 615 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 DEPDC7Q96QD5 511 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 TRIM4Q9C037 500 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 ABCG4Q9H172 646 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 TJP2Q9UDY2 1190 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 PCDHB4Q9Y5E5 795 aa14.19□□□□□ -0.14
DDX39A-201ENST00000242776 B8ZZF3 427 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 PRAMEF26H0Y7S4 382 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 PLRG1O43660 514 aaKnown RBP14.18□□□□□ -0.14
DDX39A-201ENST00000242776 RNGTTO60942 597 aaKnown RBP14.18□□□□□ -0.14
DDX39A-201ENST00000242776 NEBLO76041 1014 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 AFPP02771 609 aaKnown RBP14.18□□□□□ -0.14
DDX39A-201ENST00000242776 FYNP06241 537 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 TPM3P06753 285 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 ATP1A3P13637 1013 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 CLDN2P57739 230 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 KCNC4Q03721 635 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 PKDCCQ504Y2 493 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 SETMARQ53H47 684 aaPredicted RBP14.18□□□□□ -0.14
DDX39A-201ENST00000242776 ZC3H12AQ5D1E8 599 aaKnown RBP14.18□□□□□ -0.14
DDX39A-201ENST00000242776 AGBL4Q5VU57 503 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 CRTC1Q6UUV9 634 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 LCLAT1Q6UWP7 414 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 PRICKLE2Q7Z3G6 844 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 KDM1BQ8NB78 822 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 OR4C6Q8NH72 309 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 SLC35F5Q8WV83 523 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 IRGQQ8WZA9 623 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 AZIN2Q96A70 460 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 SERPINB11Q96P15 392 aa14.18□□□□□ -0.14
DDX39A-201ENST00000242776 SPAG5Q96R06 1193 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms