RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CHERPQ8IWX8 916 aaKnown RBP15.81■□□□□ 0.12
DDX55-201ENST00000238146 TMEM151AQ8N4L1 468 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 MARK4Q96L34 752 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 ACE2Q9BYF1 805 aaPredicted RBP15.81■□□□□ 0.12
DDX55-201ENST00000238146 PRDM12Q9H4Q4 367 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 EFCAB1Q9HAE3 211 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 ZBTB26Q9HCK0 441 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 ZNF112Q9UJU3 913 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 CNOT11Q9UKZ1 510 aaKnown RBP15.81■□□□□ 0.12
DDX55-201ENST00000238146 RNF11Q9Y3C5 154 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 C7orf72A4D263 438 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 TADA2AO75478 443 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 SBK3P0C264 359 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 PSMC3P17980 439 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 PTPN1P18031 435 aaKnown RBP15.8■□□□□ 0.12
DDX55-201ENST00000238146 TCN1P20061 433 aaPredicted RBP15.8■□□□□ 0.12
DDX55-201ENST00000238146 NSUN2Q08J23 767 aaKnown RBP eCLIP15.8■□□□□ 0.12
DDX55-201ENST00000238146 IFRD2Q12894 506 aaPredicted RBP15.8■□□□□ 0.12
DDX55-201ENST00000238146 DCTN2Q13561 401 aaKnown RBP15.8■□□□□ 0.12
DDX55-201ENST00000238146 HERC3Q15034 1050 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 MGAT5BQ3V5L5 792 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 BRWD3Q6RI45 1802 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 PLPPR4Q7Z2D5 763 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 PPP1R16BQ96T49 567 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 IGSF9Q9P2J2 1179 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 THEGQ9P2T0 379 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 DOCK1Q14185 1865 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 TCAF2A6NFQ2 919 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 ADARP55265 1226 aaKnown RBP15.8■□□□□ 0.12
DDX55-201ENST00000238146 SNX16P57768 344 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 RFTN1Q14699 578 aaPredicted RBP15.8■□□□□ 0.12
DDX55-201ENST00000238146 CYTH1Q15438 398 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 NRF1Q16656 503 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 IL23RQ5VWK5 629 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 NXNQ6DKJ4 435 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 PID1Q7Z2X4 250 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 TP53INP2Q8IXH6 220 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 NUP93Q8N1F7 819 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 CEP70Q8NHQ1 597 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 MFSD3Q96ES6 412 aa15.8■□□□□ 0.12
DDX55-201ENST00000238146 LCP1P13796 627 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 NAGLUP54802 743 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 PRKAA1Q13131 559 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 PRAMEF18Q5VWM3 479 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 LIPMQ5VYY2 423 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 DCAF15Q66K64 600 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 ZYG11AQ6WRX3 759 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 TSPAN14Q8NG11 270 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 ATP6V1E2Q96A05 226 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 EME1Q96AY2 570 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 TMA16Q96EY4 203 aaKnown RBP15.79■□□□□ 0.12
DDX55-201ENST00000238146 NPAS2Q99743 824 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 TMPRSS4Q9NRS4 437 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 HACL1Q9UJ83 578 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 VANGL2Q9ULK5 521 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 FZD10Q9ULW2 581 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 CDYLQ9Y232 598 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 KCNK1O00180 336 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 VAPBO95292 243 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 GALK1P51570 392 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 PGGT1BP53609 377 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 PPIDQ08752 370 aaKnown RBP15.79■□□□□ 0.12
DDX55-201ENST00000238146 MPP3Q13368 585 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 C7orf31Q8N865 590 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 ZSCAN18Q8TBC5 510 aaPredicted RBP15.79■□□□□ 0.12
DDX55-201ENST00000238146 DIS3LQ8TF46 1054 aaKnown RBP15.79■□□□□ 0.12
DDX55-201ENST00000238146 VPS39Q96JC1 886 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 PHF12Q96QT6 1004 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 MCMBPQ9BTE3 642 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 TASP1Q9H6P5 420 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 EPS15L1Q9UBC2 864 aa15.79■□□□□ 0.12
DDX55-201ENST00000238146 COPG1Q9Y678 874 aaKnown RBP15.79■□□□□ 0.12
DDX55-201ENST00000238146 A0A087WZ62 844 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 ZNF23P17027 643 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 ARF4P18085 180 aaPredicted RBP15.78■□□□□ 0.12
DDX55-201ENST00000238146 HK2P52789 917 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 FAM187BQ17R55 369 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 SAMD7Q7Z3H4 446 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 LSMEM2Q8N112 164 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 CNTD1Q8N815 330 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 KLHL23Q8NBE8 558 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 TMIGD2Q96BF3 282 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 ZNF512Q96ME7 567 aaPredicted RBP15.78■□□□□ 0.12
DDX55-201ENST00000238146 FDXACB1Q9BRP7 624 aaPredicted RBP15.78■□□□□ 0.12
DDX55-201ENST00000238146 C1QTNF1Q9BXJ1 281 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 NFKBIZQ9BYH8 718 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 SUDS3Q9H7L9 328 aaPredicted RBP15.78■□□□□ 0.12
DDX55-201ENST00000238146 COQ10BQ9H8M1 238 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 BFARQ9NZS9 450 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 RCOR3Q9P2K3 495 aaPredicted RBP15.78■□□□□ 0.12
DDX55-201ENST00000238146 PPP1R1BQ9UD71 204 aaPredicted RBP15.78■□□□□ 0.12
DDX55-201ENST00000238146 RSL24D1Q9UHA3 163 aaKnown RBP15.78■□□□□ 0.12
DDX55-201ENST00000238146 MID2Q9UJV3 735 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 PPEF2O14830 753 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 HCRTO43612 131 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 TIMM44O43615 452 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 IMPDH2P12268 514 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 PHKA2P46019 1235 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 ZNF280AP59817 542 aaPredicted RBP15.78■□□□□ 0.12
DDX55-201ENST00000238146 TXNL4AP83876 142 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms